Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Clca1Q9D7Z6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Clca1Q9D7Z6 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.16■■□□□ 1.78
Clca1Q9D7Z6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Clca1Q9D7Z6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Clca1Q9D7Z6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Clca1Q9D7Z6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Clca1Q9D7Z6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Clca1Q9D7Z6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Clca1Q9D7Z6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Clca1Q9D7Z6 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.06■■□□□ 1.76
Clca1Q9D7Z6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Clca1Q9D7Z6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.05■■□□□ 1.76
Clca1Q9D7Z6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Clca1Q9D7Z6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26■■□□□ 1.75
Clca1Q9D7Z6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Clca1Q9D7Z6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Clca1Q9D7Z6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Clca1Q9D7Z6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Clca1Q9D7Z6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Clca1Q9D7Z6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Clca1Q9D7Z6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Clca1Q9D7Z6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Clca1Q9D7Z6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Clca1Q9D7Z6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Clca1Q9D7Z6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.86■■□□□ 1.73
Clca1Q9D7Z6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Clca1Q9D7Z6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Clca1Q9D7Z6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Clca1Q9D7Z6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Clca1Q9D7Z6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Clca1Q9D7Z6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Clca1Q9D7Z6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Clca1Q9D7Z6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Clca1Q9D7Z6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Clca1Q9D7Z6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Clca1Q9D7Z6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.78■■□□□ 1.72
Clca1Q9D7Z6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
Clca1Q9D7Z6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Clca1Q9D7Z6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Clca1Q9D7Z6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Clca1Q9D7Z6 Mipep-204ENSMUST00000225043 1548 ntBASIC25.73■■□□□ 1.71
Clca1Q9D7Z6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.72■■□□□ 1.71
Clca1Q9D7Z6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Clca1Q9D7Z6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Clca1Q9D7Z6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Clca1Q9D7Z6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Clca1Q9D7Z6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Clca1Q9D7Z6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Clca1Q9D7Z6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Clca1Q9D7Z6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Clca1Q9D7Z6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Clca1Q9D7Z6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Clca1Q9D7Z6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Clca1Q9D7Z6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Clca1Q9D7Z6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Clca1Q9D7Z6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Clca1Q9D7Z6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Clca1Q9D7Z6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Clca1Q9D7Z6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Clca1Q9D7Z6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Clca1Q9D7Z6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Clca1Q9D7Z6 Peli2-204ENSMUST00000226513 1320 ntBASIC25.55■■□□□ 1.68
Clca1Q9D7Z6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Clca1Q9D7Z6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Clca1Q9D7Z6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.52■■□□□ 1.68
Clca1Q9D7Z6 Zfp131-205ENSMUST00000223812 663 ntBASIC25.52■■□□□ 1.68
Clca1Q9D7Z6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Clca1Q9D7Z6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Clca1Q9D7Z6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Clca1Q9D7Z6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Clca1Q9D7Z6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Clca1Q9D7Z6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Clca1Q9D7Z6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Clca1Q9D7Z6 Gm16148-201ENSMUST00000119653 893 ntBASIC25.47■■□□□ 1.67
Clca1Q9D7Z6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Clca1Q9D7Z6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Clca1Q9D7Z6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Clca1Q9D7Z6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Clca1Q9D7Z6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.42■■□□□ 1.66
Clca1Q9D7Z6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Clca1Q9D7Z6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Clca1Q9D7Z6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Clca1Q9D7Z6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Clca1Q9D7Z6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Clca1Q9D7Z6 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.4■■□□□ 1.66
Clca1Q9D7Z6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Clca1Q9D7Z6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Clca1Q9D7Z6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Clca1Q9D7Z6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Clca1Q9D7Z6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Clca1Q9D7Z6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Clca1Q9D7Z6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Clca1Q9D7Z6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Clca1Q9D7Z6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Clca1Q9D7Z6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Clca1Q9D7Z6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Clca1Q9D7Z6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.34■■□□□ 1.65
Clca1Q9D7Z6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Clca1Q9D7Z6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms