Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Chd1lQ9CXF7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Chd1lQ9CXF7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Chd1lQ9CXF7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.41■■■□□ 2.3
Chd1lQ9CXF7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Chd1lQ9CXF7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Chd1lQ9CXF7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Chd1lQ9CXF7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.38■■■□□ 2.29
Chd1lQ9CXF7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Chd1lQ9CXF7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Chd1lQ9CXF7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Chd1lQ9CXF7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Chd1lQ9CXF7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Chd1lQ9CXF7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
Chd1lQ9CXF7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Chd1lQ9CXF7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Chd1lQ9CXF7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Chd1lQ9CXF7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Chd1lQ9CXF7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Chd1lQ9CXF7 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.32■■■□□ 2.28
Chd1lQ9CXF7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Chd1lQ9CXF7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.31■■■□□ 2.28
Chd1lQ9CXF7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Chd1lQ9CXF7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.26■■■□□ 2.28
Chd1lQ9CXF7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Chd1lQ9CXF7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
Chd1lQ9CXF7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Chd1lQ9CXF7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Chd1lQ9CXF7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
Chd1lQ9CXF7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.25■■■□□ 2.27
Chd1lQ9CXF7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Chd1lQ9CXF7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.25■■■□□ 2.27
Chd1lQ9CXF7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Chd1lQ9CXF7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Chd1lQ9CXF7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Chd1lQ9CXF7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Chd1lQ9CXF7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.21■■■□□ 2.27
Chd1lQ9CXF7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Chd1lQ9CXF7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Chd1lQ9CXF7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Chd1lQ9CXF7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Chd1lQ9CXF7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Chd1lQ9CXF7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Chd1lQ9CXF7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Chd1lQ9CXF7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Chd1lQ9CXF7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Chd1lQ9CXF7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Chd1lQ9CXF7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Chd1lQ9CXF7 Amer2-203ENSMUST00000225247 2662 ntBASIC29.12■■■□□ 2.25
Chd1lQ9CXF7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Chd1lQ9CXF7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.1■■■□□ 2.25
Chd1lQ9CXF7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
Chd1lQ9CXF7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Chd1lQ9CXF7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Chd1lQ9CXF7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Chd1lQ9CXF7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Chd1lQ9CXF7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
Chd1lQ9CXF7 Rab21-202ENSMUST00000218831 843 ntBASIC29.05■■■□□ 2.24
Chd1lQ9CXF7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Chd1lQ9CXF7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Chd1lQ9CXF7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Chd1lQ9CXF7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Chd1lQ9CXF7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Chd1lQ9CXF7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
Chd1lQ9CXF7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Chd1lQ9CXF7 Mipep-204ENSMUST00000225043 1548 ntBASIC28.98■■■□□ 2.23
Chd1lQ9CXF7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Chd1lQ9CXF7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Chd1lQ9CXF7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Chd1lQ9CXF7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Chd1lQ9CXF7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
Chd1lQ9CXF7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.93■■■□□ 2.22
Chd1lQ9CXF7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Chd1lQ9CXF7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.91■■■□□ 2.22
Chd1lQ9CXF7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Chd1lQ9CXF7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
Chd1lQ9CXF7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Chd1lQ9CXF7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
Chd1lQ9CXF7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.9■■■□□ 2.22
Chd1lQ9CXF7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Chd1lQ9CXF7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Chd1lQ9CXF7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Chd1lQ9CXF7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Chd1lQ9CXF7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Chd1lQ9CXF7 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.81■■■□□ 2.2
Chd1lQ9CXF7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Chd1lQ9CXF7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.8■■■□□ 2.2
Chd1lQ9CXF7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Chd1lQ9CXF7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Chd1lQ9CXF7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.78■■■□□ 2.2
Chd1lQ9CXF7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Chd1lQ9CXF7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Chd1lQ9CXF7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.76■■■□□ 2.19
Chd1lQ9CXF7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Chd1lQ9CXF7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Chd1lQ9CXF7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Chd1lQ9CXF7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Chd1lQ9CXF7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Chd1lQ9CXF7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
Chd1lQ9CXF7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms