Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cotl1Q9CQI6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cotl1Q9CQI6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cotl1Q9CQI6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cotl1Q9CQI6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cotl1Q9CQI6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cotl1Q9CQI6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.9■□□□□ 0.78
Cotl1Q9CQI6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cotl1Q9CQI6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cotl1Q9CQI6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cotl1Q9CQI6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
Cotl1Q9CQI6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cotl1Q9CQI6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cotl1Q9CQI6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cotl1Q9CQI6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cotl1Q9CQI6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cotl1Q9CQI6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cotl1Q9CQI6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Cotl1Q9CQI6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cotl1Q9CQI6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cotl1Q9CQI6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cotl1Q9CQI6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cotl1Q9CQI6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cotl1Q9CQI6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cotl1Q9CQI6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cotl1Q9CQI6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cotl1Q9CQI6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cotl1Q9CQI6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.79■□□□□ 0.76
Cotl1Q9CQI6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.78■□□□□ 0.76
Cotl1Q9CQI6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.77■□□□□ 0.76
Cotl1Q9CQI6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cotl1Q9CQI6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cotl1Q9CQI6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cotl1Q9CQI6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cotl1Q9CQI6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cotl1Q9CQI6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cotl1Q9CQI6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cotl1Q9CQI6 Rab21-202ENSMUST00000218831 843 ntBASIC19.72■□□□□ 0.75
Cotl1Q9CQI6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cotl1Q9CQI6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cotl1Q9CQI6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cotl1Q9CQI6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cotl1Q9CQI6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cotl1Q9CQI6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cotl1Q9CQI6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cotl1Q9CQI6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cotl1Q9CQI6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Cotl1Q9CQI6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cotl1Q9CQI6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cotl1Q9CQI6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cotl1Q9CQI6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cotl1Q9CQI6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cotl1Q9CQI6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.59■□□□□ 0.73
Cotl1Q9CQI6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cotl1Q9CQI6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.58■□□□□ 0.72
Cotl1Q9CQI6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cotl1Q9CQI6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cotl1Q9CQI6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cotl1Q9CQI6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.55■□□□□ 0.72
Cotl1Q9CQI6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cotl1Q9CQI6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.54■□□□□ 0.72
Cotl1Q9CQI6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cotl1Q9CQI6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cotl1Q9CQI6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cotl1Q9CQI6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Cotl1Q9CQI6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cotl1Q9CQI6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cotl1Q9CQI6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cotl1Q9CQI6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cotl1Q9CQI6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cotl1Q9CQI6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cotl1Q9CQI6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cotl1Q9CQI6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cotl1Q9CQI6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cotl1Q9CQI6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cotl1Q9CQI6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cotl1Q9CQI6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cotl1Q9CQI6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cotl1Q9CQI6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cotl1Q9CQI6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cotl1Q9CQI6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.44■□□□□ 0.7
Cotl1Q9CQI6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cotl1Q9CQI6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cotl1Q9CQI6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cotl1Q9CQI6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cotl1Q9CQI6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cotl1Q9CQI6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cotl1Q9CQI6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cotl1Q9CQI6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cotl1Q9CQI6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cotl1Q9CQI6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cotl1Q9CQI6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms