Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Nkx6-1Q99MA9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Nkx6-1Q99MA9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Nkx6-1Q99MA9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.28■■□□□ 1.64
Nkx6-1Q99MA9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Nkx6-1Q99MA9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Nkx6-1Q99MA9 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.25■■□□□ 1.63
Nkx6-1Q99MA9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.24■■□□□ 1.63
Nkx6-1Q99MA9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Nkx6-1Q99MA9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Nkx6-1Q99MA9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Nkx6-1Q99MA9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Nkx6-1Q99MA9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Nkx6-1Q99MA9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Nkx6-1Q99MA9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Nkx6-1Q99MA9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx6-1Q99MA9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Nkx6-1Q99MA9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Nkx6-1Q99MA9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Nkx6-1Q99MA9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.1■■□□□ 1.61
Nkx6-1Q99MA9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.1■■□□□ 1.61
Nkx6-1Q99MA9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx6-1Q99MA9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx6-1Q99MA9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Nkx6-1Q99MA9 Gm9397-201ENSMUST00000200125 605 ntBASIC25.08■■□□□ 1.61
Nkx6-1Q99MA9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Nkx6-1Q99MA9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Nkx6-1Q99MA9 Mipep-204ENSMUST00000225043 1548 ntBASIC25.06■■□□□ 1.6
Nkx6-1Q99MA9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Nkx6-1Q99MA9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nkx6-1Q99MA9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nkx6-1Q99MA9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Nkx6-1Q99MA9 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.03■■□□□ 1.6
Nkx6-1Q99MA9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
Nkx6-1Q99MA9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Nkx6-1Q99MA9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
Nkx6-1Q99MA9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.01■■□□□ 1.59
Nkx6-1Q99MA9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25■■□□□ 1.59
Nkx6-1Q99MA9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nkx6-1Q99MA9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nkx6-1Q99MA9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nkx6-1Q99MA9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.96■■□□□ 1.59
Nkx6-1Q99MA9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nkx6-1Q99MA9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Nkx6-1Q99MA9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Nkx6-1Q99MA9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Nkx6-1Q99MA9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nkx6-1Q99MA9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.92■■□□□ 1.58
Nkx6-1Q99MA9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Nkx6-1Q99MA9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Nkx6-1Q99MA9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Nkx6-1Q99MA9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.86■■□□□ 1.57
Nkx6-1Q99MA9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.85■■□□□ 1.57
Nkx6-1Q99MA9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.85■■□□□ 1.57
Nkx6-1Q99MA9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Nkx6-1Q99MA9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Nkx6-1Q99MA9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Nkx6-1Q99MA9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.82■■□□□ 1.56
Nkx6-1Q99MA9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.81■■□□□ 1.56
Nkx6-1Q99MA9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.81■■□□□ 1.56
Nkx6-1Q99MA9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Nkx6-1Q99MA9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Nkx6-1Q99MA9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.74■■□□□ 1.55
Nkx6-1Q99MA9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nkx6-1Q99MA9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nkx6-1Q99MA9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Nkx6-1Q99MA9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Nkx6-1Q99MA9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.69■■□□□ 1.54
Nkx6-1Q99MA9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.69■■□□□ 1.54
Nkx6-1Q99MA9 Gm24970-201ENSMUST00000175582 82 ntBASIC24.68■■□□□ 1.54
Nkx6-1Q99MA9 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.64■■□□□ 1.54
Nkx6-1Q99MA9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nkx6-1Q99MA9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.61■■□□□ 1.53
Nkx6-1Q99MA9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Nkx6-1Q99MA9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Nkx6-1Q99MA9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.55■■□□□ 1.52
Nkx6-1Q99MA9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Nkx6-1Q99MA9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Nkx6-1Q99MA9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Nkx6-1Q99MA9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.54■■□□□ 1.52
Nkx6-1Q99MA9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.54■■□□□ 1.52
Nkx6-1Q99MA9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Nkx6-1Q99MA9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.53■■□□□ 1.52
Nkx6-1Q99MA9 Gm8503-201ENSMUST00000118131 455 ntBASIC24.5■■□□□ 1.51
Nkx6-1Q99MA9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nkx6-1Q99MA9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.47■■□□□ 1.51
Nkx6-1Q99MA9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nkx6-1Q99MA9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Nkx6-1Q99MA9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nkx6-1Q99MA9 Gm6821-201ENSMUST00000107540 542 ntBASIC24.45■■□□□ 1.5
Nkx6-1Q99MA9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nkx6-1Q99MA9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nkx6-1Q99MA9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Nkx6-1Q99MA9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Nkx6-1Q99MA9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Nkx6-1Q99MA9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Nkx6-1Q99MA9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Nkx6-1Q99MA9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Nkx6-1Q99MA9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx6-1Q99MA9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms