Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CDC6Q99741 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.46■■□□□ 1.99
CDC6Q99741 AL133380.1-201ENST00000506013 324 ntBASIC27.44■■□□□ 1.98
CDC6Q99741 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.44■■□□□ 1.98
CDC6Q99741 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CDC6Q99741 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CDC6Q99741 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDC6Q99741 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDC6Q99741 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC6Q99741 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
CDC6Q99741 MIR3665-201ENST00000578708 105 ntBASIC27.38■■□□□ 1.97
CDC6Q99741 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDC6Q99741 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CDC6Q99741 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.36■■□□□ 1.97
CDC6Q99741 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.36■■□□□ 1.97
CDC6Q99741 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.35■■□□□ 1.97
CDC6Q99741 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.34■■□□□ 1.97
CDC6Q99741 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.34■■□□□ 1.97
CDC6Q99741 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC6Q99741 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC6Q99741 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC6Q99741 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
CDC6Q99741 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC6Q99741 ABHD17AP4-201ENST00000411545 909 ntBASIC27.29■■□□□ 1.96
CDC6Q99741 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDC6Q99741 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC6Q99741 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDC6Q99741 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDC6Q99741 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.28■■□□□ 1.96
CDC6Q99741 MIR7108-201ENST00000614319 87 ntBASIC27.28■■□□□ 1.96
CDC6Q99741 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.25■■□□□ 1.95
CDC6Q99741 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.25■■□□□ 1.95
CDC6Q99741 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CDC6Q99741 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CDC6Q99741 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.23■■□□□ 1.95
CDC6Q99741 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.22■■□□□ 1.95
CDC6Q99741 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC6Q99741 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDC6Q99741 AC087741.3-201ENST00000624270 1347 ntBASIC27.19■■□□□ 1.94
CDC6Q99741 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.19■■□□□ 1.94
CDC6Q99741 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CDC6Q99741 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.17■■□□□ 1.94
CDC6Q99741 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDC6Q99741 AC044849.2-201ENST00000606596 710 ntBASIC27.15■■□□□ 1.94
CDC6Q99741 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.13■■□□□ 1.93
CDC6Q99741 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CDC6Q99741 DUX4L28-201ENST00000623687 678 ntBASIC27.12■■□□□ 1.93
CDC6Q99741 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.11■■□□□ 1.93
CDC6Q99741 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CDC6Q99741 MIR762-201ENST00000390236 83 ntBASIC27.08■■□□□ 1.93
CDC6Q99741 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CDC6Q99741 AC005559.1-201ENST00000589661 871 ntBASIC27.07■■□□□ 1.92
CDC6Q99741 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.06■■□□□ 1.92
CDC6Q99741 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.05■■□□□ 1.92
CDC6Q99741 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CDC6Q99741 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CDC6Q99741 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
CDC6Q99741 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.02■■□□□ 1.92
CDC6Q99741 HLA-V-202ENST00000446817 847 ntBASIC27.02■■□□□ 1.92
CDC6Q99741 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.01■■□□□ 1.91
CDC6Q99741 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CDC6Q99741 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27■■□□□ 1.91
CDC6Q99741 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
CDC6Q99741 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.99■■□□□ 1.91
CDC6Q99741 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC6Q99741 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.98■■□□□ 1.91
CDC6Q99741 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
CDC6Q99741 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
CDC6Q99741 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.94■■□□□ 1.9
CDC6Q99741 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC6Q99741 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC6Q99741 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC6Q99741 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CDC6Q99741 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.92■■□□□ 1.9
CDC6Q99741 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC6Q99741 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.91■■□□□ 1.9
CDC6Q99741 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CDC6Q99741 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CDC6Q99741 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC6Q99741 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.9■■□□□ 1.9
CDC6Q99741 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.9■■□□□ 1.9
CDC6Q99741 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.89■■□□□ 1.9
CDC6Q99741 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.88■■□□□ 1.89
CDC6Q99741 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.88■■□□□ 1.89
CDC6Q99741 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.87■■□□□ 1.89
CDC6Q99741 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDC6Q99741 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CDC6Q99741 ZNRF2P2-203ENST00000454624 420 ntBASIC26.84■■□□□ 1.89
CDC6Q99741 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC6Q99741 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CDC6Q99741 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
CDC6Q99741 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CDC6Q99741 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CDC6Q99741 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.79■■□□□ 1.88
CDC6Q99741 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CDC6Q99741 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC6Q99741 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.77■■□□□ 1.88
CDC6Q99741 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC6Q99741 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.75■■□□□ 1.87
CDC6Q99741 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms