Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF183Q96D59 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF183Q96D59 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF183Q96D59 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF183Q96D59 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF183Q96D59 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF183Q96D59 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF183Q96D59 AC136428.2-201ENST00000563187 214 ntBASIC20.33■□□□□ 0.85
RNF183Q96D59 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF183Q96D59 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF183Q96D59 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RNF183Q96D59 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF183Q96D59 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF183Q96D59 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF183Q96D59 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RNF183Q96D59 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RNF183Q96D59 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF183Q96D59 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF183Q96D59 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF183Q96D59 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF183Q96D59 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF183Q96D59 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF183Q96D59 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF183Q96D59 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF183Q96D59 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF183Q96D59 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF183Q96D59 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF183Q96D59 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RNF183Q96D59 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF183Q96D59 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF183Q96D59 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF183Q96D59 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF183Q96D59 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF183Q96D59 AL133380.1-201ENST00000506013 324 ntBASIC20.19■□□□□ 0.82
RNF183Q96D59 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RNF183Q96D59 SUZ12P1-203ENST00000578195 985 ntBASIC20.17■□□□□ 0.82
RNF183Q96D59 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RNF183Q96D59 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF183Q96D59 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RNF183Q96D59 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.16■□□□□ 0.82
RNF183Q96D59 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.16■□□□□ 0.82
RNF183Q96D59 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF183Q96D59 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF183Q96D59 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF183Q96D59 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF183Q96D59 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF183Q96D59 AL161658.1-201ENST00000623641 1967 ntBASIC20.12■□□□□ 0.81
RNF183Q96D59 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF183Q96D59 CAHM-201ENST00000604200 896 ntBASIC20.11■□□□□ 0.81
RNF183Q96D59 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF183Q96D59 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF183Q96D59 AL391121.1-201ENST00000607967 1349 ntBASIC20.08■□□□□ 0.81
RNF183Q96D59 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RNF183Q96D59 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF183Q96D59 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF183Q96D59 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF183Q96D59 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF183Q96D59 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF183Q96D59 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF183Q96D59 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF183Q96D59 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF183Q96D59 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF183Q96D59 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF183Q96D59 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF183Q96D59 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF183Q96D59 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF183Q96D59 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF183Q96D59 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF183Q96D59 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF183Q96D59 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RNF183Q96D59 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF183Q96D59 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF183Q96D59 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF183Q96D59 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF183Q96D59 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF183Q96D59 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF183Q96D59 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF183Q96D59 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF183Q96D59 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF183Q96D59 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF183Q96D59 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF183Q96D59 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF183Q96D59 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF183Q96D59 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF183Q96D59 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF183Q96D59 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
RNF183Q96D59 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF183Q96D59 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF183Q96D59 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF183Q96D59 AC139426.1-201ENST00000568218 2529 ntBASIC19.91■□□□□ 0.78
RNF183Q96D59 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF183Q96D59 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF183Q96D59 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF183Q96D59 AP006261.1-201ENST00000584783 668 ntBASIC19.9■□□□□ 0.78
RNF183Q96D59 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF183Q96D59 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF183Q96D59 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF183Q96D59 RPS2P35-201ENST00000443417 897 ntBASIC19.89■□□□□ 0.77
RNF183Q96D59 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.89■□□□□ 0.77
RNF183Q96D59 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms