Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPB3Q92617 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPB3Q92617 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.85■■□□□ 1.09
NPIPB3Q92617 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPB3Q92617 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPB3Q92617 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPIPB3Q92617 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NPIPB3Q92617 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPIPB3Q92617 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.78■■□□□ 1.08
NPIPB3Q92617 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.78■■□□□ 1.08
NPIPB3Q92617 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.78■■□□□ 1.08
NPIPB3Q92617 AC006077.2-201ENST00000623591 457 ntBASIC21.78■■□□□ 1.08
NPIPB3Q92617 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPIPB3Q92617 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NPIPB3Q92617 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPB3Q92617 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPIPB3Q92617 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.76■■□□□ 1.07
NPIPB3Q92617 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.76■■□□□ 1.07
NPIPB3Q92617 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPIPB3Q92617 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPIPB3Q92617 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPIPB3Q92617 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPB3Q92617 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPIPB3Q92617 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPB3Q92617 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPB3Q92617 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.69■■□□□ 1.06
NPIPB3Q92617 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPB3Q92617 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.68■■□□□ 1.06
NPIPB3Q92617 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NPIPB3Q92617 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPB3Q92617 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPB3Q92617 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NPIPB3Q92617 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPB3Q92617 AC120057.4-201ENST00000624722 1615 ntBASIC21.66■■□□□ 1.06
NPIPB3Q92617 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB3Q92617 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.65■■□□□ 1.06
NPIPB3Q92617 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPB3Q92617 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NPIPB3Q92617 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
NPIPB3Q92617 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.64■■□□□ 1.05
NPIPB3Q92617 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB3Q92617 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPB3Q92617 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.63■■□□□ 1.05
NPIPB3Q92617 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.62■■□□□ 1.05
NPIPB3Q92617 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB3Q92617 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB3Q92617 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPB3Q92617 ZNRF2P1-201ENST00000441407 443 ntBASIC21.59■■□□□ 1.05
NPIPB3Q92617 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.59■■□□□ 1.05
NPIPB3Q92617 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NPIPB3Q92617 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB3Q92617 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.56■■□□□ 1.04
NPIPB3Q92617 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NPIPB3Q92617 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB3Q92617 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
NPIPB3Q92617 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NPIPB3Q92617 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.54■■□□□ 1.04
NPIPB3Q92617 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPB3Q92617 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPB3Q92617 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NPIPB3Q92617 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPB3Q92617 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NPIPB3Q92617 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NPIPB3Q92617 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NPIPB3Q92617 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPB3Q92617 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NPIPB3Q92617 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.5■■□□□ 1.03
NPIPB3Q92617 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.49■■□□□ 1.03
NPIPB3Q92617 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NPIPB3Q92617 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.49■■□□□ 1.03
NPIPB3Q92617 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.48■■□□□ 1.03
NPIPB3Q92617 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NPIPB3Q92617 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.47■■□□□ 1.03
NPIPB3Q92617 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.47■■□□□ 1.03
NPIPB3Q92617 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB3Q92617 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NPIPB3Q92617 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB3Q92617 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB3Q92617 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NPIPB3Q92617 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NPIPB3Q92617 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPB3Q92617 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NPIPB3Q92617 ABCB10P1-201ENST00000614297 2181 ntBASIC21.43■■□□□ 1.02
NPIPB3Q92617 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NPIPB3Q92617 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.42■■□□□ 1.02
NPIPB3Q92617 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPIPB3Q92617 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPIPB3Q92617 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
NPIPB3Q92617 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NPIPB3Q92617 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPB3Q92617 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPB3Q92617 DYNLL1-208ENST00000550178 581 ntBASIC21.38■■□□□ 1.01
NPIPB3Q92617 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPB3Q92617 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPB3Q92617 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPIPB3Q92617 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
NPIPB3Q92617 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.36■■□□□ 1.01
NPIPB3Q92617 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
NPIPB3Q92617 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.35■■□□□ 1.01
NPIPB3Q92617 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms