Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb20Q91XZ9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb20Q91XZ9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb20Q91XZ9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb20Q91XZ9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.28■■□□□ 1.64
Pcdhb20Q91XZ9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcdhb20Q91XZ9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Pcdhb20Q91XZ9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.25■■□□□ 1.63
Pcdhb20Q91XZ9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Pcdhb20Q91XZ9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb20Q91XZ9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhb20Q91XZ9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
Pcdhb20Q91XZ9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhb20Q91XZ9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb20Q91XZ9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhb20Q91XZ9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb20Q91XZ9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb20Q91XZ9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb20Q91XZ9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.14■■□□□ 1.62
Pcdhb20Q91XZ9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb20Q91XZ9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Pcdhb20Q91XZ9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb20Q91XZ9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb20Q91XZ9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Pcdhb20Q91XZ9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.08■■□□□ 1.61
Pcdhb20Q91XZ9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.07■■□□□ 1.6
Pcdhb20Q91XZ9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb20Q91XZ9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb20Q91XZ9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Pcdhb20Q91XZ9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb20Q91XZ9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb20Q91XZ9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb20Q91XZ9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb20Q91XZ9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb20Q91XZ9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb20Q91XZ9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb20Q91XZ9 Zfp131-205ENSMUST00000223812 663 ntBASIC24.98■■□□□ 1.59
Pcdhb20Q91XZ9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb20Q91XZ9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
Pcdhb20Q91XZ9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb20Q91XZ9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb20Q91XZ9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.89■■□□□ 1.58
Pcdhb20Q91XZ9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb20Q91XZ9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb20Q91XZ9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb20Q91XZ9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhb20Q91XZ9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Pcdhb20Q91XZ9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb20Q91XZ9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb20Q91XZ9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb20Q91XZ9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
Pcdhb20Q91XZ9 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.81■■□□□ 1.56
Pcdhb20Q91XZ9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb20Q91XZ9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.8■■□□□ 1.56
Pcdhb20Q91XZ9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb20Q91XZ9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Pcdhb20Q91XZ9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb20Q91XZ9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb20Q91XZ9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.77■■□□□ 1.56
Pcdhb20Q91XZ9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.77■■□□□ 1.56
Pcdhb20Q91XZ9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb20Q91XZ9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb20Q91XZ9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb20Q91XZ9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb20Q91XZ9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.75■■□□□ 1.55
Pcdhb20Q91XZ9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb20Q91XZ9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb20Q91XZ9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb20Q91XZ9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb20Q91XZ9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb20Q91XZ9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Pcdhb20Q91XZ9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.55
Pcdhb20Q91XZ9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb20Q91XZ9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb20Q91XZ9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhb20Q91XZ9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.69■■□□□ 1.54
Pcdhb20Q91XZ9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Pcdhb20Q91XZ9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdhb20Q91XZ9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb20Q91XZ9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb20Q91XZ9 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.66■■□□□ 1.54
Pcdhb20Q91XZ9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.65■■□□□ 1.54
Pcdhb20Q91XZ9 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.65■■□□□ 1.54
Pcdhb20Q91XZ9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.64■■□□□ 1.54
Pcdhb20Q91XZ9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Pcdhb20Q91XZ9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.63■■□□□ 1.53
Pcdhb20Q91XZ9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb20Q91XZ9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb20Q91XZ9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcdhb20Q91XZ9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb20Q91XZ9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb20Q91XZ9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhb20Q91XZ9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb20Q91XZ9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb20Q91XZ9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb20Q91XZ9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.54■■□□□ 1.52
Pcdhb20Q91XZ9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb20Q91XZ9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Pcdhb20Q91XZ9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb20Q91XZ9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms