Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PSPC1Q8WXF1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PSPC1Q8WXF1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
PSPC1Q8WXF1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.83■■■□□ 2.53
PSPC1Q8WXF1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.8■■■□□ 2.52
PSPC1Q8WXF1 AC136428.2-201ENST00000563187 214 ntBASIC30.8■■■□□ 2.52
PSPC1Q8WXF1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PSPC1Q8WXF1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.79■■■□□ 2.52
PSPC1Q8WXF1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PSPC1Q8WXF1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PSPC1Q8WXF1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.77■■■□□ 2.52
PSPC1Q8WXF1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PSPC1Q8WXF1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PSPC1Q8WXF1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PSPC1Q8WXF1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.74■■■□□ 2.51
PSPC1Q8WXF1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.73■■■□□ 2.51
PSPC1Q8WXF1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.73■■■□□ 2.51
PSPC1Q8WXF1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PSPC1Q8WXF1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.71■■■□□ 2.51
PSPC1Q8WXF1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.7■■■□□ 2.51
PSPC1Q8WXF1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PSPC1Q8WXF1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PSPC1Q8WXF1 AL133380.1-201ENST00000506013 324 ntBASIC30.66■■■□□ 2.5
PSPC1Q8WXF1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.66■■■□□ 2.5
PSPC1Q8WXF1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PSPC1Q8WXF1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.65■■■□□ 2.5
PSPC1Q8WXF1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PSPC1Q8WXF1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PSPC1Q8WXF1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PSPC1Q8WXF1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.61■■■□□ 2.49
PSPC1Q8WXF1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PSPC1Q8WXF1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PSPC1Q8WXF1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PSPC1Q8WXF1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PSPC1Q8WXF1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
PSPC1Q8WXF1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PSPC1Q8WXF1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
PSPC1Q8WXF1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.57■■■□□ 2.48
PSPC1Q8WXF1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.56■■■□□ 2.48
PSPC1Q8WXF1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PSPC1Q8WXF1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PSPC1Q8WXF1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
PSPC1Q8WXF1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PSPC1Q8WXF1 SUZ12P1-203ENST00000578195 985 ntBASIC30.54■■■□□ 2.48
PSPC1Q8WXF1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PSPC1Q8WXF1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.52■■■□□ 2.48
PSPC1Q8WXF1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.5■■■□□ 2.47
PSPC1Q8WXF1 CAHM-201ENST00000604200 896 ntBASIC30.5■■■□□ 2.47
PSPC1Q8WXF1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PSPC1Q8WXF1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
PSPC1Q8WXF1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PSPC1Q8WXF1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.45■■■□□ 2.47
PSPC1Q8WXF1 AL391121.1-201ENST00000607967 1349 ntBASIC30.45■■■□□ 2.46
PSPC1Q8WXF1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PSPC1Q8WXF1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PSPC1Q8WXF1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PSPC1Q8WXF1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PSPC1Q8WXF1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PSPC1Q8WXF1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PSPC1Q8WXF1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.42■■■□□ 2.46
PSPC1Q8WXF1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PSPC1Q8WXF1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.42■■■□□ 2.46
PSPC1Q8WXF1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
PSPC1Q8WXF1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PSPC1Q8WXF1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
PSPC1Q8WXF1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PSPC1Q8WXF1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PSPC1Q8WXF1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
PSPC1Q8WXF1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
PSPC1Q8WXF1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.35■■■□□ 2.45
PSPC1Q8WXF1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
PSPC1Q8WXF1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.35■■■□□ 2.45
PSPC1Q8WXF1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PSPC1Q8WXF1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PSPC1Q8WXF1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.32■■■□□ 2.44
PSPC1Q8WXF1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PSPC1Q8WXF1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.3■■■□□ 2.44
PSPC1Q8WXF1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PSPC1Q8WXF1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PSPC1Q8WXF1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
PSPC1Q8WXF1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
PSPC1Q8WXF1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
PSPC1Q8WXF1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
PSPC1Q8WXF1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
PSPC1Q8WXF1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PSPC1Q8WXF1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.24■■■□□ 2.43
PSPC1Q8WXF1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PSPC1Q8WXF1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PSPC1Q8WXF1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.24■■■□□ 2.43
PSPC1Q8WXF1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.22■■■□□ 2.43
PSPC1Q8WXF1 WASH5P-204ENST00000632292 975 ntBASIC30.2■■■□□ 2.43
PSPC1Q8WXF1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
PSPC1Q8WXF1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
PSPC1Q8WXF1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PSPC1Q8WXF1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.17■■■□□ 2.42
PSPC1Q8WXF1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
PSPC1Q8WXF1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PSPC1Q8WXF1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PSPC1Q8WXF1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PSPC1Q8WXF1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms