Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Kdm4cQ8VCD7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Kdm4cQ8VCD7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.08■■■□□ 2.57
Kdm4cQ8VCD7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Kdm4cQ8VCD7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Kdm4cQ8VCD7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Kdm4cQ8VCD7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Kdm4cQ8VCD7 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.04■■■□□ 2.56
Kdm4cQ8VCD7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
Kdm4cQ8VCD7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
Kdm4cQ8VCD7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Kdm4cQ8VCD7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.02■■■□□ 2.56
Kdm4cQ8VCD7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Kdm4cQ8VCD7 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.02■■■□□ 2.56
Kdm4cQ8VCD7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Kdm4cQ8VCD7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Kdm4cQ8VCD7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Kdm4cQ8VCD7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Kdm4cQ8VCD7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Kdm4cQ8VCD7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Kdm4cQ8VCD7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Kdm4cQ8VCD7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Kdm4cQ8VCD7 Mipep-204ENSMUST00000225043 1548 ntBASIC30.93■■■□□ 2.54
Kdm4cQ8VCD7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Kdm4cQ8VCD7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Kdm4cQ8VCD7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Kdm4cQ8VCD7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Kdm4cQ8VCD7 Zxda-201ENSMUST00000117281 2621 ntBASIC30.89■■■□□ 2.53
Kdm4cQ8VCD7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Kdm4cQ8VCD7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.88■■■□□ 2.53
Kdm4cQ8VCD7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Kdm4cQ8VCD7 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.87■■■□□ 2.53
Kdm4cQ8VCD7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
Kdm4cQ8VCD7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Kdm4cQ8VCD7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kdm4cQ8VCD7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kdm4cQ8VCD7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Kdm4cQ8VCD7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Kdm4cQ8VCD7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Kdm4cQ8VCD7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Kdm4cQ8VCD7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Kdm4cQ8VCD7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Kdm4cQ8VCD7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Kdm4cQ8VCD7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Kdm4cQ8VCD7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm4cQ8VCD7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm4cQ8VCD7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.71■■■□□ 2.51
Kdm4cQ8VCD7 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.7■■■□□ 2.5
Kdm4cQ8VCD7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm4cQ8VCD7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm4cQ8VCD7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm4cQ8VCD7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Kdm4cQ8VCD7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm4cQ8VCD7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm4cQ8VCD7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm4cQ8VCD7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm4cQ8VCD7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Kdm4cQ8VCD7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.64■■■□□ 2.5
Kdm4cQ8VCD7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Kdm4cQ8VCD7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
Kdm4cQ8VCD7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Kdm4cQ8VCD7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm4cQ8VCD7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Kdm4cQ8VCD7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Kdm4cQ8VCD7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Kdm4cQ8VCD7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Kdm4cQ8VCD7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.51■■■□□ 2.47
Kdm4cQ8VCD7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Kdm4cQ8VCD7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kdm4cQ8VCD7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kdm4cQ8VCD7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Kdm4cQ8VCD7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Kdm4cQ8VCD7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Kdm4cQ8VCD7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Kdm4cQ8VCD7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Kdm4cQ8VCD7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
Kdm4cQ8VCD7 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.34■■■□□ 2.45
Kdm4cQ8VCD7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Kdm4cQ8VCD7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Kdm4cQ8VCD7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Kdm4cQ8VCD7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Kdm4cQ8VCD7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Kdm4cQ8VCD7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Kdm4cQ8VCD7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.28■■■□□ 2.44
Kdm4cQ8VCD7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Kdm4cQ8VCD7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Kdm4cQ8VCD7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Kdm4cQ8VCD7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.26■■■□□ 2.43
Kdm4cQ8VCD7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Kdm4cQ8VCD7 Amer2-203ENSMUST00000225247 2662 ntBASIC30.25■■■□□ 2.43
Kdm4cQ8VCD7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm4cQ8VCD7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Kdm4cQ8VCD7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Kdm4cQ8VCD7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.22■■■□□ 2.43
Kdm4cQ8VCD7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Kdm4cQ8VCD7 Gm25262-201ENSMUST00000174934 133 ntBASIC30.2■■■□□ 2.43
Kdm4cQ8VCD7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Kdm4cQ8VCD7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Kdm4cQ8VCD7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Kdm4cQ8VCD7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms