Protein–RNA interactions for Protein: Q8R307

Vps18, Vacuolar protein sorting-associated protein 18 homolog, mousemouse

Predictions only

Length 973 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps18Q8R307 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vps18Q8R307 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vps18Q8R307 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vps18Q8R307 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vps18Q8R307 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vps18Q8R307 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Vps18Q8R307 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Vps18Q8R307 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Vps18Q8R307 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.12■■■□□ 2.09
Vps18Q8R307 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vps18Q8R307 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Vps18Q8R307 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Vps18Q8R307 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.09■■■□□ 2.09
Vps18Q8R307 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Vps18Q8R307 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Vps18Q8R307 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Vps18Q8R307 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Vps18Q8R307 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Vps18Q8R307 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Vps18Q8R307 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vps18Q8R307 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vps18Q8R307 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Vps18Q8R307 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Vps18Q8R307 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Vps18Q8R307 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vps18Q8R307 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.96■■■□□ 2.07
Vps18Q8R307 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Vps18Q8R307 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.95■■■□□ 2.07
Vps18Q8R307 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
Vps18Q8R307 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Vps18Q8R307 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.94■■■□□ 2.06
Vps18Q8R307 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.92■■■□□ 2.06
Vps18Q8R307 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.9■■■□□ 2.06
Vps18Q8R307 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vps18Q8R307 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Vps18Q8R307 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Vps18Q8R307 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Vps18Q8R307 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Vps18Q8R307 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Vps18Q8R307 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.86■■■□□ 2.05
Vps18Q8R307 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.86■■■□□ 2.05
Vps18Q8R307 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vps18Q8R307 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Vps18Q8R307 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Vps18Q8R307 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.81■■■□□ 2.04
Vps18Q8R307 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Vps18Q8R307 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vps18Q8R307 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vps18Q8R307 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Vps18Q8R307 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Vps18Q8R307 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Vps18Q8R307 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Vps18Q8R307 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Vps18Q8R307 Gm26115-201ENSMUST00000175605 87 ntBASIC27.74■■■□□ 2.03
Vps18Q8R307 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Vps18Q8R307 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Vps18Q8R307 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Vps18Q8R307 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Vps18Q8R307 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Vps18Q8R307 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Vps18Q8R307 Amer2-203ENSMUST00000225247 2662 ntBASIC27.67■■■□□ 2.02
Vps18Q8R307 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Vps18Q8R307 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vps18Q8R307 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vps18Q8R307 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Vps18Q8R307 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Vps18Q8R307 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Vps18Q8R307 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.63■■■□□ 2.01
Vps18Q8R307 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Vps18Q8R307 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Vps18Q8R307 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Vps18Q8R307 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Vps18Q8R307 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Vps18Q8R307 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Vps18Q8R307 Gm8109-201ENSMUST00000194076 746 ntBASIC27.58■■■□□ 2.01
Vps18Q8R307 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Vps18Q8R307 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Vps18Q8R307 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Vps18Q8R307 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
Vps18Q8R307 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Vps18Q8R307 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
Vps18Q8R307 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.53■■■□□ 2
Vps18Q8R307 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Vps18Q8R307 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.52■■■□□ 2
Vps18Q8R307 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
Vps18Q8R307 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vps18Q8R307 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
Vps18Q8R307 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms