Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SIMC1Q8NDZ2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.12■■□□□ 1.77
SIMC1Q8NDZ2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SIMC1Q8NDZ2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SIMC1Q8NDZ2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
SIMC1Q8NDZ2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
SIMC1Q8NDZ2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.1■■□□□ 1.77
SIMC1Q8NDZ2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.1■■□□□ 1.77
SIMC1Q8NDZ2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SIMC1Q8NDZ2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.08■■□□□ 1.77
SIMC1Q8NDZ2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SIMC1Q8NDZ2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SIMC1Q8NDZ2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SIMC1Q8NDZ2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
SIMC1Q8NDZ2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SIMC1Q8NDZ2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SIMC1Q8NDZ2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SIMC1Q8NDZ2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.01■■□□□ 1.75
SIMC1Q8NDZ2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.01■■□□□ 1.75
SIMC1Q8NDZ2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.01■■□□□ 1.75
SIMC1Q8NDZ2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SIMC1Q8NDZ2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SIMC1Q8NDZ2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.98■■□□□ 1.75
SIMC1Q8NDZ2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SIMC1Q8NDZ2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.93■■□□□ 1.74
SIMC1Q8NDZ2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.93■■□□□ 1.74
SIMC1Q8NDZ2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SIMC1Q8NDZ2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SIMC1Q8NDZ2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.91■■□□□ 1.74
SIMC1Q8NDZ2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.91■■□□□ 1.74
SIMC1Q8NDZ2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.9■■□□□ 1.74
SIMC1Q8NDZ2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.9■■□□□ 1.74
SIMC1Q8NDZ2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
SIMC1Q8NDZ2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SIMC1Q8NDZ2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SIMC1Q8NDZ2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SIMC1Q8NDZ2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
SIMC1Q8NDZ2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SIMC1Q8NDZ2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SIMC1Q8NDZ2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.85■■□□□ 1.73
SIMC1Q8NDZ2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.85■■□□□ 1.73
SIMC1Q8NDZ2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SIMC1Q8NDZ2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SIMC1Q8NDZ2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SIMC1Q8NDZ2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIMC1Q8NDZ2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SIMC1Q8NDZ2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIMC1Q8NDZ2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIMC1Q8NDZ2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SIMC1Q8NDZ2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SIMC1Q8NDZ2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SIMC1Q8NDZ2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SIMC1Q8NDZ2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.8■■□□□ 1.72
SIMC1Q8NDZ2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.79■■□□□ 1.72
SIMC1Q8NDZ2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.79■■□□□ 1.72
SIMC1Q8NDZ2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SIMC1Q8NDZ2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.78■■□□□ 1.72
SIMC1Q8NDZ2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.77■■□□□ 1.72
SIMC1Q8NDZ2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SIMC1Q8NDZ2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SIMC1Q8NDZ2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.74■■□□□ 1.71
SIMC1Q8NDZ2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SIMC1Q8NDZ2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SIMC1Q8NDZ2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
SIMC1Q8NDZ2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SIMC1Q8NDZ2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SIMC1Q8NDZ2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SIMC1Q8NDZ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.72■■□□□ 1.71
SIMC1Q8NDZ2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SIMC1Q8NDZ2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SIMC1Q8NDZ2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.7■■□□□ 1.7
SIMC1Q8NDZ2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SIMC1Q8NDZ2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SIMC1Q8NDZ2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.68■■□□□ 1.7
SIMC1Q8NDZ2 AC120057.4-201ENST00000624722 1615 ntBASIC25.67■■□□□ 1.7
SIMC1Q8NDZ2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SIMC1Q8NDZ2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.66■■□□□ 1.7
SIMC1Q8NDZ2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.66■■□□□ 1.7
SIMC1Q8NDZ2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SIMC1Q8NDZ2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SIMC1Q8NDZ2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.63■■□□□ 1.69
SIMC1Q8NDZ2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SIMC1Q8NDZ2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SIMC1Q8NDZ2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SIMC1Q8NDZ2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SIMC1Q8NDZ2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SIMC1Q8NDZ2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.6■■□□□ 1.69
SIMC1Q8NDZ2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SIMC1Q8NDZ2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.58■■□□□ 1.69
SIMC1Q8NDZ2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIMC1Q8NDZ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SIMC1Q8NDZ2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
SIMC1Q8NDZ2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SIMC1Q8NDZ2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SIMC1Q8NDZ2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SIMC1Q8NDZ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SIMC1Q8NDZ2 RARRES2P7-201ENST00000567349 469 ntBASIC25.54■■□□□ 1.68
SIMC1Q8NDZ2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SIMC1Q8NDZ2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.53■■□□□ 1.68
SIMC1Q8NDZ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms