Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
USP38Q8NB14 AL162393.1-201ENST00000437852 946 ntBASIC31.14■■■□□ 2.58
USP38Q8NB14 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
USP38Q8NB14 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.13■■■□□ 2.57
USP38Q8NB14 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
USP38Q8NB14 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.11■■■□□ 2.57
USP38Q8NB14 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
USP38Q8NB14 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.08■■■□□ 2.57
USP38Q8NB14 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
USP38Q8NB14 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.06■■■□□ 2.56
USP38Q8NB14 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP38Q8NB14 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP38Q8NB14 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
USP38Q8NB14 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.04■■■□□ 2.56
USP38Q8NB14 MIR7108-201ENST00000614319 87 ntBASIC31.02■■■□□ 2.56
USP38Q8NB14 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
USP38Q8NB14 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.56
USP38Q8NB14 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
USP38Q8NB14 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
USP38Q8NB14 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
USP38Q8NB14 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.92■■■□□ 2.54
USP38Q8NB14 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP38Q8NB14 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
USP38Q8NB14 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP38Q8NB14 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP38Q8NB14 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.89■■■□□ 2.54
USP38Q8NB14 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP38Q8NB14 ABHD17AP4-201ENST00000411545 909 ntBASIC30.88■■■□□ 2.53
USP38Q8NB14 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
USP38Q8NB14 CAHM-201ENST00000604200 896 ntBASIC30.87■■■□□ 2.53
USP38Q8NB14 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
USP38Q8NB14 AP006261.1-201ENST00000584783 668 ntBASIC30.86■■■□□ 2.53
USP38Q8NB14 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
USP38Q8NB14 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP38Q8NB14 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.82■■■□□ 2.52
USP38Q8NB14 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
USP38Q8NB14 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP38Q8NB14 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.78■■■□□ 2.52
USP38Q8NB14 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
USP38Q8NB14 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
USP38Q8NB14 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
USP38Q8NB14 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.77■■■□□ 2.52
USP38Q8NB14 HLA-V-202ENST00000446817 847 ntBASIC30.76■■■□□ 2.51
USP38Q8NB14 AL133380.1-201ENST00000506013 324 ntBASIC30.76■■■□□ 2.51
USP38Q8NB14 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USP38Q8NB14 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USP38Q8NB14 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP38Q8NB14 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USP38Q8NB14 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.72■■■□□ 2.51
USP38Q8NB14 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.71■■■□□ 2.51
USP38Q8NB14 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
USP38Q8NB14 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
USP38Q8NB14 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.71■■■□□ 2.51
USP38Q8NB14 AL391121.1-201ENST00000607967 1349 ntBASIC30.7■■■□□ 2.5
USP38Q8NB14 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
USP38Q8NB14 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
USP38Q8NB14 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
USP38Q8NB14 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.68■■■□□ 2.5
USP38Q8NB14 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.68■■■□□ 2.5
USP38Q8NB14 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
USP38Q8NB14 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USP38Q8NB14 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
USP38Q8NB14 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
USP38Q8NB14 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.66■■■□□ 2.5
USP38Q8NB14 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USP38Q8NB14 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
USP38Q8NB14 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
USP38Q8NB14 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
USP38Q8NB14 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.62■■■□□ 2.49
USP38Q8NB14 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
USP38Q8NB14 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.61■■■□□ 2.49
USP38Q8NB14 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
USP38Q8NB14 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.58■■■□□ 2.49
USP38Q8NB14 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.57■■■□□ 2.48
USP38Q8NB14 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
USP38Q8NB14 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
USP38Q8NB14 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
USP38Q8NB14 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
USP38Q8NB14 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
USP38Q8NB14 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.54■■■□□ 2.48
USP38Q8NB14 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
USP38Q8NB14 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
USP38Q8NB14 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
USP38Q8NB14 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
USP38Q8NB14 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.51■■■□□ 2.47
USP38Q8NB14 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.49■■■□□ 2.47
USP38Q8NB14 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.49■■■□□ 2.47
USP38Q8NB14 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
USP38Q8NB14 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.45■■■□□ 2.47
USP38Q8NB14 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
USP38Q8NB14 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
USP38Q8NB14 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
USP38Q8NB14 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
USP38Q8NB14 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
USP38Q8NB14 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.42■■■□□ 2.46
USP38Q8NB14 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.42■■■□□ 2.46
USP38Q8NB14 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
USP38Q8NB14 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.4■■■□□ 2.46
USP38Q8NB14 MIR3665-201ENST00000578708 105 ntBASIC30.4■■■□□ 2.46
USP38Q8NB14 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms