Protein–RNA interactions for Protein: Q8N6K7

SAMD3, Sterile alpha motif domain-containing protein 3, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3Q8N6K7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SAMD3Q8N6K7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SAMD3Q8N6K7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SAMD3Q8N6K7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.85■■■□□ 2.69
SAMD3Q8N6K7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SAMD3Q8N6K7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.84■■■□□ 2.69
SAMD3Q8N6K7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SAMD3Q8N6K7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.83■■■□□ 2.69
SAMD3Q8N6K7 AL133380.1-201ENST00000506013 324 ntBASIC31.82■■■□□ 2.68
SAMD3Q8N6K7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.82■■■□□ 2.68
SAMD3Q8N6K7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.81■■■□□ 2.68
SAMD3Q8N6K7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SAMD3Q8N6K7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SAMD3Q8N6K7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SAMD3Q8N6K7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.78■■■□□ 2.68
SAMD3Q8N6K7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SAMD3Q8N6K7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.77■■■□□ 2.68
SAMD3Q8N6K7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.75■■■□□ 2.67
SAMD3Q8N6K7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SAMD3Q8N6K7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SAMD3Q8N6K7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.72■■■□□ 2.67
SAMD3Q8N6K7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SAMD3Q8N6K7 SUZ12P1-203ENST00000578195 985 ntBASIC31.71■■■□□ 2.67
SAMD3Q8N6K7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.71■■■□□ 2.67
SAMD3Q8N6K7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.67
SAMD3Q8N6K7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.69■■■□□ 2.66
SAMD3Q8N6K7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SAMD3Q8N6K7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.68■■■□□ 2.66
SAMD3Q8N6K7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SAMD3Q8N6K7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.66■■■□□ 2.66
SAMD3Q8N6K7 CAHM-201ENST00000604200 896 ntBASIC31.66■■■□□ 2.66
SAMD3Q8N6K7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SAMD3Q8N6K7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SAMD3Q8N6K7 AL391121.1-201ENST00000607967 1349 ntBASIC31.62■■■□□ 2.65
SAMD3Q8N6K7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SAMD3Q8N6K7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SAMD3Q8N6K7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
SAMD3Q8N6K7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.56■■■□□ 2.64
SAMD3Q8N6K7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SAMD3Q8N6K7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SAMD3Q8N6K7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
SAMD3Q8N6K7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
SAMD3Q8N6K7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
SAMD3Q8N6K7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SAMD3Q8N6K7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SAMD3Q8N6K7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
SAMD3Q8N6K7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SAMD3Q8N6K7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SAMD3Q8N6K7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.46■■■□□ 2.63
SAMD3Q8N6K7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.44■■■□□ 2.62
SAMD3Q8N6K7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SAMD3Q8N6K7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.43■■■□□ 2.62
SAMD3Q8N6K7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.43■■■□□ 2.62
SAMD3Q8N6K7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.41■■■□□ 2.62
SAMD3Q8N6K7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
SAMD3Q8N6K7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SAMD3Q8N6K7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SAMD3Q8N6K7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SAMD3Q8N6K7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SAMD3Q8N6K7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
SAMD3Q8N6K7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SAMD3Q8N6K7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SAMD3Q8N6K7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SAMD3Q8N6K7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SAMD3Q8N6K7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.35■■■□□ 2.61
SAMD3Q8N6K7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SAMD3Q8N6K7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.34■■■□□ 2.61
SAMD3Q8N6K7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SAMD3Q8N6K7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SAMD3Q8N6K7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SAMD3Q8N6K7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SAMD3Q8N6K7 WASH5P-204ENST00000632292 975 ntBASIC31.33■■■□□ 2.61
SAMD3Q8N6K7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SAMD3Q8N6K7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SAMD3Q8N6K7 AP006261.1-201ENST00000584783 668 ntBASIC31.29■■■□□ 2.6
SAMD3Q8N6K7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SAMD3Q8N6K7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.27■■■□□ 2.6
SAMD3Q8N6K7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.27■■■□□ 2.6
SAMD3Q8N6K7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SAMD3Q8N6K7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SAMD3Q8N6K7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SAMD3Q8N6K7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SAMD3Q8N6K7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SAMD3Q8N6K7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SAMD3Q8N6K7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SAMD3Q8N6K7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SAMD3Q8N6K7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.19■■■□□ 2.58
SAMD3Q8N6K7 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.17■■■□□ 2.58
SAMD3Q8N6K7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.15■■■□□ 2.58
SAMD3Q8N6K7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.15■■■□□ 2.58
SAMD3Q8N6K7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
SAMD3Q8N6K7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.14■■■□□ 2.58
SAMD3Q8N6K7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SAMD3Q8N6K7 AL162393.1-201ENST00000437852 946 ntBASIC31.13■■■□□ 2.57
SAMD3Q8N6K7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms