Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.01■■□□□ 1.91
RAB42Q8N4Z0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27■■□□□ 1.91
RAB42Q8N4Z0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAB42Q8N4Z0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RAB42Q8N4Z0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RAB42Q8N4Z0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.98■■□□□ 1.91
RAB42Q8N4Z0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.98■■□□□ 1.91
RAB42Q8N4Z0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.95■■□□□ 1.91
RAB42Q8N4Z0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
RAB42Q8N4Z0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.93■■□□□ 1.9
RAB42Q8N4Z0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.92■■□□□ 1.9
RAB42Q8N4Z0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RAB42Q8N4Z0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
RAB42Q8N4Z0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAB42Q8N4Z0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAB42Q8N4Z0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
RAB42Q8N4Z0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.88■■□□□ 1.89
RAB42Q8N4Z0 RARRES2P7-201ENST00000567349 469 ntBASIC26.87■■□□□ 1.89
RAB42Q8N4Z0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAB42Q8N4Z0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RAB42Q8N4Z0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.83■■□□□ 1.89
RAB42Q8N4Z0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RAB42Q8N4Z0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.82■■□□□ 1.88
RAB42Q8N4Z0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
RAB42Q8N4Z0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.81■■□□□ 1.88
RAB42Q8N4Z0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RAB42Q8N4Z0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.8■■□□□ 1.88
RAB42Q8N4Z0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RAB42Q8N4Z0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RAB42Q8N4Z0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.79■■□□□ 1.88
RAB42Q8N4Z0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
RAB42Q8N4Z0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RAB42Q8N4Z0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
RAB42Q8N4Z0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.76■■□□□ 1.87
RAB42Q8N4Z0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.75■■□□□ 1.87
RAB42Q8N4Z0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RAB42Q8N4Z0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RAB42Q8N4Z0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAB42Q8N4Z0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RAB42Q8N4Z0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RAB42Q8N4Z0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RAB42Q8N4Z0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RAB42Q8N4Z0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RAB42Q8N4Z0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RAB42Q8N4Z0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RAB42Q8N4Z0 SETD8P1-201ENST00000623146 1180 ntBASIC26.69■■□□□ 1.86
RAB42Q8N4Z0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.68■■□□□ 1.86
RAB42Q8N4Z0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.65■■□□□ 1.86
RAB42Q8N4Z0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAB42Q8N4Z0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAB42Q8N4Z0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RAB42Q8N4Z0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAB42Q8N4Z0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAB42Q8N4Z0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAB42Q8N4Z0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
RAB42Q8N4Z0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAB42Q8N4Z0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.58■■□□□ 1.85
RAB42Q8N4Z0 AL133380.1-201ENST00000506013 324 ntBASIC26.58■■□□□ 1.85
RAB42Q8N4Z0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RAB42Q8N4Z0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.56■■□□□ 1.84
RAB42Q8N4Z0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAB42Q8N4Z0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RAB42Q8N4Z0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.55■■□□□ 1.84
RAB42Q8N4Z0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RAB42Q8N4Z0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RAB42Q8N4Z0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAB42Q8N4Z0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RAB42Q8N4Z0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RAB42Q8N4Z0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 AC120057.4-201ENST00000624722 1615 ntBASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 AC097358.2-201ENST00000607541 1159 ntBASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RAB42Q8N4Z0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RAB42Q8N4Z0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAB42Q8N4Z0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RAB42Q8N4Z0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RAB42Q8N4Z0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RAB42Q8N4Z0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RAB42Q8N4Z0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.45■■□□□ 1.82
RAB42Q8N4Z0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RAB42Q8N4Z0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.44■■□□□ 1.82
RAB42Q8N4Z0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.44■■□□□ 1.82
RAB42Q8N4Z0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RAB42Q8N4Z0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RAB42Q8N4Z0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RAB42Q8N4Z0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
RAB42Q8N4Z0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RAB42Q8N4Z0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.42■■□□□ 1.82
RAB42Q8N4Z0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.42■■□□□ 1.82
RAB42Q8N4Z0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
RAB42Q8N4Z0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.41■■□□□ 1.82
RAB42Q8N4Z0 AC136428.2-201ENST00000563187 214 ntBASIC26.41■■□□□ 1.82
RAB42Q8N4Z0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RAB42Q8N4Z0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RAB42Q8N4Z0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAB42Q8N4Z0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
RAB42Q8N4Z0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.38■■□□□ 1.81
RAB42Q8N4Z0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms