Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
SIX5Q8N196 HNRNPLP2-201ENST00000568980 1570 ntBASIC29.1■■■□□ 2.25
SIX5Q8N196 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
SIX5Q8N196 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SIX5Q8N196 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SIX5Q8N196 ABHD17AP4-201ENST00000411545 909 ntBASIC29.07■■■□□ 2.24
SIX5Q8N196 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
SIX5Q8N196 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SIX5Q8N196 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.03■■■□□ 2.24
SIX5Q8N196 AL133380.1-201ENST00000506013 324 ntBASIC29.03■■■□□ 2.24
SIX5Q8N196 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SIX5Q8N196 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.03■■■□□ 2.24
SIX5Q8N196 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
SIX5Q8N196 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.01■■■□□ 2.23
SIX5Q8N196 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29■■■□□ 2.23
SIX5Q8N196 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SIX5Q8N196 MIR3665-201ENST00000578708 105 ntBASIC28.99■■■□□ 2.23
SIX5Q8N196 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.97■■■□□ 2.23
SIX5Q8N196 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.97■■■□□ 2.23
SIX5Q8N196 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SIX5Q8N196 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
SIX5Q8N196 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.95■■■□□ 2.22
SIX5Q8N196 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
SIX5Q8N196 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SIX5Q8N196 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.92■■■□□ 2.22
SIX5Q8N196 AC087741.3-201ENST00000624270 1347 ntBASIC28.88■■■□□ 2.21
SIX5Q8N196 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
SIX5Q8N196 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SIX5Q8N196 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SIX5Q8N196 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SIX5Q8N196 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.86■■■□□ 2.21
SIX5Q8N196 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SIX5Q8N196 HLA-V-202ENST00000446817 847 ntBASIC28.85■■■□□ 2.21
SIX5Q8N196 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
SIX5Q8N196 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SIX5Q8N196 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.84■■■□□ 2.21
SIX5Q8N196 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.83■■■□□ 2.21
SIX5Q8N196 DUX4L28-201ENST00000623687 678 ntBASIC28.82■■■□□ 2.2
SIX5Q8N196 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.78■■■□□ 2.2
SIX5Q8N196 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SIX5Q8N196 AC044849.2-201ENST00000606596 710 ntBASIC28.77■■■□□ 2.2
SIX5Q8N196 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.77■■■□□ 2.2
SIX5Q8N196 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.76■■■□□ 2.19
SIX5Q8N196 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.76■■■□□ 2.19
SIX5Q8N196 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.76■■■□□ 2.19
SIX5Q8N196 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SIX5Q8N196 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SIX5Q8N196 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.73■■■□□ 2.19
SIX5Q8N196 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SIX5Q8N196 MIR762-201ENST00000390236 83 ntBASIC28.7■■■□□ 2.18
SIX5Q8N196 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SIX5Q8N196 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.69■■■□□ 2.18
SIX5Q8N196 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
SIX5Q8N196 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
SIX5Q8N196 AC005559.1-201ENST00000589661 871 ntBASIC28.67■■■□□ 2.18
SIX5Q8N196 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.66■■■□□ 2.18
SIX5Q8N196 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SIX5Q8N196 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.64■■■□□ 2.18
SIX5Q8N196 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SIX5Q8N196 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SIX5Q8N196 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.63■■■□□ 2.17
SIX5Q8N196 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SIX5Q8N196 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SIX5Q8N196 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.58■■■□□ 2.17
SIX5Q8N196 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.58■■■□□ 2.17
SIX5Q8N196 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.57■■■□□ 2.16
SIX5Q8N196 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.56■■■□□ 2.16
SIX5Q8N196 ZNRF2P2-203ENST00000454624 420 ntBASIC28.56■■■□□ 2.16
SIX5Q8N196 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.54■■■□□ 2.16
SIX5Q8N196 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.54■■■□□ 2.16
SIX5Q8N196 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.53■■■□□ 2.16
SIX5Q8N196 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.53■■■□□ 2.16
SIX5Q8N196 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SIX5Q8N196 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
SIX5Q8N196 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SIX5Q8N196 BOD1-206ENST00000480951 814 ntTSL 2 BASIC28.51■■■□□ 2.15
SIX5Q8N196 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SIX5Q8N196 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SIX5Q8N196 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SIX5Q8N196 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SIX5Q8N196 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.43■■■□□ 2.14
SIX5Q8N196 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SIX5Q8N196 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
SIX5Q8N196 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SIX5Q8N196 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SIX5Q8N196 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SIX5Q8N196 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.38■■■□□ 2.13
SIX5Q8N196 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SIX5Q8N196 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.38■■■□□ 2.13
SIX5Q8N196 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SIX5Q8N196 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.37■■■□□ 2.13
SIX5Q8N196 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SIX5Q8N196 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SIX5Q8N196 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.37■■■□□ 2.13
SIX5Q8N196 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.35■■■□□ 2.13
SIX5Q8N196 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SIX5Q8N196 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SIX5Q8N196 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SIX5Q8N196 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.32■■■□□ 2.12
SIX5Q8N196 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms