Protein–RNA interactions for Protein: Q8K4M5

Commd1, COMM domain-containing protein 1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd1Q8K4M5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Commd1Q8K4M5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Commd1Q8K4M5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Commd1Q8K4M5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Commd1Q8K4M5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.32■■□□□ 1.16
Commd1Q8K4M5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Commd1Q8K4M5 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.32■■□□□ 1.16
Commd1Q8K4M5 Zfp131-205ENSMUST00000223812 663 ntBASIC22.3■■□□□ 1.16
Commd1Q8K4M5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Commd1Q8K4M5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Commd1Q8K4M5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Commd1Q8K4M5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Commd1Q8K4M5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Commd1Q8K4M5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.25■■□□□ 1.15
Commd1Q8K4M5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Commd1Q8K4M5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Commd1Q8K4M5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Commd1Q8K4M5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Commd1Q8K4M5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.21■■□□□ 1.15
Commd1Q8K4M5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Commd1Q8K4M5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Commd1Q8K4M5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Commd1Q8K4M5 Gm16148-201ENSMUST00000119653 893 ntBASIC22.18■■□□□ 1.14
Commd1Q8K4M5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Commd1Q8K4M5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Commd1Q8K4M5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Commd1Q8K4M5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Commd1Q8K4M5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.13■■□□□ 1.13
Commd1Q8K4M5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Commd1Q8K4M5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Commd1Q8K4M5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Commd1Q8K4M5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Commd1Q8K4M5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Commd1Q8K4M5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Commd1Q8K4M5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Commd1Q8K4M5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Commd1Q8K4M5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.1■■□□□ 1.13
Commd1Q8K4M5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Commd1Q8K4M5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Commd1Q8K4M5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Commd1Q8K4M5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.08■■□□□ 1.13
Commd1Q8K4M5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Commd1Q8K4M5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Commd1Q8K4M5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Commd1Q8K4M5 Mipep-204ENSMUST00000225043 1548 ntBASIC22.04■■□□□ 1.12
Commd1Q8K4M5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Commd1Q8K4M5 Peli2-204ENSMUST00000226513 1320 ntBASIC22.03■■□□□ 1.12
Commd1Q8K4M5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.01■■□□□ 1.11
Commd1Q8K4M5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Commd1Q8K4M5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Commd1Q8K4M5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Commd1Q8K4M5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Commd1Q8K4M5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Commd1Q8K4M5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Commd1Q8K4M5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Commd1Q8K4M5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Commd1Q8K4M5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Commd1Q8K4M5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Commd1Q8K4M5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Commd1Q8K4M5 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.91■■□□□ 1.1
Commd1Q8K4M5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Commd1Q8K4M5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Commd1Q8K4M5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Commd1Q8K4M5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Commd1Q8K4M5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Commd1Q8K4M5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Commd1Q8K4M5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Commd1Q8K4M5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Commd1Q8K4M5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Commd1Q8K4M5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.84■■□□□ 1.09
Commd1Q8K4M5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Commd1Q8K4M5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Commd1Q8K4M5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Commd1Q8K4M5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Commd1Q8K4M5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Commd1Q8K4M5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Commd1Q8K4M5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.8■■□□□ 1.08
Commd1Q8K4M5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.8■■□□□ 1.08
Commd1Q8K4M5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Commd1Q8K4M5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.78■■□□□ 1.08
Commd1Q8K4M5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Commd1Q8K4M5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.76■■□□□ 1.07
Commd1Q8K4M5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.75■■□□□ 1.07
Commd1Q8K4M5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Commd1Q8K4M5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Commd1Q8K4M5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Commd1Q8K4M5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.73■■□□□ 1.07
Commd1Q8K4M5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Commd1Q8K4M5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Commd1Q8K4M5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Commd1Q8K4M5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Commd1Q8K4M5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Commd1Q8K4M5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Commd1Q8K4M5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Commd1Q8K4M5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Commd1Q8K4M5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Commd1Q8K4M5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Commd1Q8K4M5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Commd1Q8K4M5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Commd1Q8K4M5 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms