Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC36Q8IYA8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC36Q8IYA8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC36Q8IYA8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC36Q8IYA8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC36Q8IYA8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CCDC36Q8IYA8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC36Q8IYA8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
CCDC36Q8IYA8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC36Q8IYA8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.44■■□□□ 1.5
CCDC36Q8IYA8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC36Q8IYA8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
CCDC36Q8IYA8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC36Q8IYA8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CCDC36Q8IYA8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCDC36Q8IYA8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC36Q8IYA8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCDC36Q8IYA8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.39■■□□□ 1.49
CCDC36Q8IYA8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC36Q8IYA8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
CCDC36Q8IYA8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.38■■□□□ 1.49
CCDC36Q8IYA8 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC36Q8IYA8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.37■■□□□ 1.49
CCDC36Q8IYA8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.36■■□□□ 1.49
CCDC36Q8IYA8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC36Q8IYA8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC36Q8IYA8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CCDC36Q8IYA8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC36Q8IYA8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCDC36Q8IYA8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC36Q8IYA8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC36Q8IYA8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.32■■□□□ 1.48
CCDC36Q8IYA8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC36Q8IYA8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC36Q8IYA8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
CCDC36Q8IYA8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC36Q8IYA8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
CCDC36Q8IYA8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC36Q8IYA8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.3■■□□□ 1.48
CCDC36Q8IYA8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC36Q8IYA8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.27■■□□□ 1.48
CCDC36Q8IYA8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC36Q8IYA8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCDC36Q8IYA8 RARRES2P7-201ENST00000567349 469 ntBASIC24.25■■□□□ 1.47
CCDC36Q8IYA8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCDC36Q8IYA8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.24■■□□□ 1.47
CCDC36Q8IYA8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCDC36Q8IYA8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.23■■□□□ 1.47
CCDC36Q8IYA8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.23■■□□□ 1.47
CCDC36Q8IYA8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCDC36Q8IYA8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.21■■□□□ 1.47
CCDC36Q8IYA8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.21■■□□□ 1.47
CCDC36Q8IYA8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC36Q8IYA8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.2■■□□□ 1.47
CCDC36Q8IYA8 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC36Q8IYA8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CCDC36Q8IYA8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC36Q8IYA8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC36Q8IYA8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC36Q8IYA8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC36Q8IYA8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC36Q8IYA8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC36Q8IYA8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.13■■□□□ 1.45
CCDC36Q8IYA8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.11■■□□□ 1.45
CCDC36Q8IYA8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.11■■□□□ 1.45
CCDC36Q8IYA8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC36Q8IYA8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC36Q8IYA8 SETD8P1-201ENST00000623146 1180 ntBASIC24.1■■□□□ 1.45
CCDC36Q8IYA8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC36Q8IYA8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC36Q8IYA8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC36Q8IYA8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC36Q8IYA8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC36Q8IYA8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC36Q8IYA8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.05■■□□□ 1.44
CCDC36Q8IYA8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.05■■□□□ 1.44
CCDC36Q8IYA8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC36Q8IYA8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCDC36Q8IYA8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC36Q8IYA8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.03■■□□□ 1.44
CCDC36Q8IYA8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC36Q8IYA8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC36Q8IYA8 AL133380.1-201ENST00000506013 324 ntBASIC24■■□□□ 1.43
CCDC36Q8IYA8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC36Q8IYA8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC36Q8IYA8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC36Q8IYA8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC36Q8IYA8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC36Q8IYA8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC36Q8IYA8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC36Q8IYA8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC36Q8IYA8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC36Q8IYA8 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC36Q8IYA8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
CCDC36Q8IYA8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.95■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms