Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Sox30Q8CGW4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.07■■■□□ 2.24
Sox30Q8CGW4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Sox30Q8CGW4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
Sox30Q8CGW4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Sox30Q8CGW4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Sox30Q8CGW4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Sox30Q8CGW4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Sox30Q8CGW4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Sox30Q8CGW4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
Sox30Q8CGW4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Sox30Q8CGW4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Sox30Q8CGW4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Sox30Q8CGW4 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.96■■■□□ 2.23
Sox30Q8CGW4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
Sox30Q8CGW4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sox30Q8CGW4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Sox30Q8CGW4 Mipep-204ENSMUST00000225043 1548 ntBASIC28.93■■■□□ 2.22
Sox30Q8CGW4 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.91■■■□□ 2.22
Sox30Q8CGW4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Sox30Q8CGW4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Sox30Q8CGW4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Sox30Q8CGW4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Sox30Q8CGW4 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.89■■■□□ 2.22
Sox30Q8CGW4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Sox30Q8CGW4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Sox30Q8CGW4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Sox30Q8CGW4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Sox30Q8CGW4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Sox30Q8CGW4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Sox30Q8CGW4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Sox30Q8CGW4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Sox30Q8CGW4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Sox30Q8CGW4 Zxda-201ENSMUST00000117281 2621 ntBASIC28.8■■■□□ 2.2
Sox30Q8CGW4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Sox30Q8CGW4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Sox30Q8CGW4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Sox30Q8CGW4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Sox30Q8CGW4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Sox30Q8CGW4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Sox30Q8CGW4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Sox30Q8CGW4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.7■■■□□ 2.18
Sox30Q8CGW4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Sox30Q8CGW4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Sox30Q8CGW4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Sox30Q8CGW4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.66■■■□□ 2.18
Sox30Q8CGW4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
Sox30Q8CGW4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Sox30Q8CGW4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
Sox30Q8CGW4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
Sox30Q8CGW4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Sox30Q8CGW4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Sox30Q8CGW4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
Sox30Q8CGW4 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.63■■■□□ 2.17
Sox30Q8CGW4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Sox30Q8CGW4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Sox30Q8CGW4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Sox30Q8CGW4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
Sox30Q8CGW4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Sox30Q8CGW4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.58■■■□□ 2.17
Sox30Q8CGW4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Sox30Q8CGW4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Sox30Q8CGW4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Sox30Q8CGW4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Sox30Q8CGW4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Sox30Q8CGW4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Sox30Q8CGW4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Sox30Q8CGW4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Sox30Q8CGW4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sox30Q8CGW4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.41■■■□□ 2.14
Sox30Q8CGW4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sox30Q8CGW4 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.38■■■□□ 2.13
Sox30Q8CGW4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sox30Q8CGW4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Sox30Q8CGW4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sox30Q8CGW4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.36■■■□□ 2.13
Sox30Q8CGW4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sox30Q8CGW4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sox30Q8CGW4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Sox30Q8CGW4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Sox30Q8CGW4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Sox30Q8CGW4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sox30Q8CGW4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.29■■■□□ 2.12
Sox30Q8CGW4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sox30Q8CGW4 Gm25262-201ENSMUST00000174934 133 ntBASIC28.28■■■□□ 2.12
Sox30Q8CGW4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sox30Q8CGW4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sox30Q8CGW4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sox30Q8CGW4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sox30Q8CGW4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
Sox30Q8CGW4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sox30Q8CGW4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sox30Q8CGW4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Sox30Q8CGW4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sox30Q8CGW4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Sox30Q8CGW4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Sox30Q8CGW4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sox30Q8CGW4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Sox30Q8CGW4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Sox30Q8CGW4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms