Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Mmp28Q8CGV8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Mmp28Q8CGV8 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.94■■□□□ 1.1
Mmp28Q8CGV8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mmp28Q8CGV8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Mmp28Q8CGV8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Mmp28Q8CGV8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Mmp28Q8CGV8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Mmp28Q8CGV8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp28Q8CGV8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Mmp28Q8CGV8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Mmp28Q8CGV8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Mmp28Q8CGV8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Mmp28Q8CGV8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Mmp28Q8CGV8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Mmp28Q8CGV8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Mmp28Q8CGV8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.79■■□□□ 1.08
Mmp28Q8CGV8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Mmp28Q8CGV8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Mmp28Q8CGV8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Mmp28Q8CGV8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Mmp28Q8CGV8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Mmp28Q8CGV8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Mmp28Q8CGV8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Mmp28Q8CGV8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Mmp28Q8CGV8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Mmp28Q8CGV8 Rab21-202ENSMUST00000218831 843 ntBASIC21.7■■□□□ 1.06
Mmp28Q8CGV8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mmp28Q8CGV8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Mmp28Q8CGV8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mmp28Q8CGV8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Amer2-203ENSMUST00000225247 2662 ntBASIC21.65■■□□□ 1.06
Mmp28Q8CGV8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Mmp28Q8CGV8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp28Q8CGV8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mmp28Q8CGV8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp28Q8CGV8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Mmp28Q8CGV8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Mmp28Q8CGV8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Mmp28Q8CGV8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.58■■□□□ 1.05
Mmp28Q8CGV8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.57■■□□□ 1.04
Mmp28Q8CGV8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Mmp28Q8CGV8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.56■■□□□ 1.04
Mmp28Q8CGV8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Mmp28Q8CGV8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Mmp28Q8CGV8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Mmp28Q8CGV8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp28Q8CGV8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Mmp28Q8CGV8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Mmp28Q8CGV8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Mmp28Q8CGV8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.49■■□□□ 1.03
Mmp28Q8CGV8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Mmp28Q8CGV8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Mmp28Q8CGV8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Mmp28Q8CGV8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp28Q8CGV8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Mmp28Q8CGV8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Mmp28Q8CGV8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Mmp28Q8CGV8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Mmp28Q8CGV8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Mmp28Q8CGV8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Mmp28Q8CGV8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Mmp28Q8CGV8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms