Protein–RNA interactions for Protein: Q8CFI2

Cdc34, Ubiquitin-conjugating enzyme E2 R1, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc34Q8CFI2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdc34Q8CFI2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdc34Q8CFI2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdc34Q8CFI2 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.62■□□□□ 0.89
Cdc34Q8CFI2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.61■□□□□ 0.89
Cdc34Q8CFI2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdc34Q8CFI2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc34Q8CFI2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdc34Q8CFI2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdc34Q8CFI2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdc34Q8CFI2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdc34Q8CFI2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc34Q8CFI2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc34Q8CFI2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdc34Q8CFI2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cdc34Q8CFI2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdc34Q8CFI2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.51■□□□□ 0.87
Cdc34Q8CFI2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdc34Q8CFI2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdc34Q8CFI2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdc34Q8CFI2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdc34Q8CFI2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdc34Q8CFI2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdc34Q8CFI2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdc34Q8CFI2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdc34Q8CFI2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdc34Q8CFI2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.46■□□□□ 0.87
Cdc34Q8CFI2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdc34Q8CFI2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdc34Q8CFI2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdc34Q8CFI2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdc34Q8CFI2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cdc34Q8CFI2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cdc34Q8CFI2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdc34Q8CFI2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdc34Q8CFI2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdc34Q8CFI2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdc34Q8CFI2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdc34Q8CFI2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdc34Q8CFI2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdc34Q8CFI2 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.38■□□□□ 0.85
Cdc34Q8CFI2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdc34Q8CFI2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cdc34Q8CFI2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdc34Q8CFI2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdc34Q8CFI2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Cdc34Q8CFI2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdc34Q8CFI2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdc34Q8CFI2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdc34Q8CFI2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdc34Q8CFI2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdc34Q8CFI2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdc34Q8CFI2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdc34Q8CFI2 Gm25238-201ENSMUST00000174914 89 ntBASIC20.32■□□□□ 0.84
Cdc34Q8CFI2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdc34Q8CFI2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Cdc34Q8CFI2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdc34Q8CFI2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdc34Q8CFI2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cdc34Q8CFI2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdc34Q8CFI2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdc34Q8CFI2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdc34Q8CFI2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdc34Q8CFI2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdc34Q8CFI2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cdc34Q8CFI2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdc34Q8CFI2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdc34Q8CFI2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdc34Q8CFI2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.25■□□□□ 0.83
Cdc34Q8CFI2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc34Q8CFI2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc34Q8CFI2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdc34Q8CFI2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc34Q8CFI2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc34Q8CFI2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc34Q8CFI2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdc34Q8CFI2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdc34Q8CFI2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc34Q8CFI2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdc34Q8CFI2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc34Q8CFI2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc34Q8CFI2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdc34Q8CFI2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.19■□□□□ 0.82
Cdc34Q8CFI2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdc34Q8CFI2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdc34Q8CFI2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cdc34Q8CFI2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdc34Q8CFI2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdc34Q8CFI2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.14■□□□□ 0.82
Cdc34Q8CFI2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdc34Q8CFI2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdc34Q8CFI2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdc34Q8CFI2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdc34Q8CFI2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cdc34Q8CFI2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdc34Q8CFI2 Mipep-204ENSMUST00000225043 1548 ntBASIC20.11■□□□□ 0.81
Cdc34Q8CFI2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Cdc34Q8CFI2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdc34Q8CFI2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdc34Q8CFI2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms