Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtp1Q8C8C1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtp1Q8C8C1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Rtp1Q8C8C1 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.06■■■□□ 2.56
Rtp1Q8C8C1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rtp1Q8C8C1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rtp1Q8C8C1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rtp1Q8C8C1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rtp1Q8C8C1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rtp1Q8C8C1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Rtp1Q8C8C1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rtp1Q8C8C1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.93■■■□□ 2.54
Rtp1Q8C8C1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rtp1Q8C8C1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Rtp1Q8C8C1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.91■■■□□ 2.54
Rtp1Q8C8C1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.91■■■□□ 2.54
Rtp1Q8C8C1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Rtp1Q8C8C1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rtp1Q8C8C1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rtp1Q8C8C1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtp1Q8C8C1 Gm9397-201ENSMUST00000200125 605 ntBASIC30.86■■■□□ 2.53
Rtp1Q8C8C1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rtp1Q8C8C1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtp1Q8C8C1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rtp1Q8C8C1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Rtp1Q8C8C1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rtp1Q8C8C1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rtp1Q8C8C1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rtp1Q8C8C1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rtp1Q8C8C1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.81■■■□□ 2.52
Rtp1Q8C8C1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rtp1Q8C8C1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Rtp1Q8C8C1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
Rtp1Q8C8C1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rtp1Q8C8C1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rtp1Q8C8C1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.75■■■□□ 2.51
Rtp1Q8C8C1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.73■■■□□ 2.51
Rtp1Q8C8C1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Rtp1Q8C8C1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Rtp1Q8C8C1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtp1Q8C8C1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rtp1Q8C8C1 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.68■■■□□ 2.5
Rtp1Q8C8C1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.67■■■□□ 2.5
Rtp1Q8C8C1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.67■■■□□ 2.5
Rtp1Q8C8C1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Rtp1Q8C8C1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rtp1Q8C8C1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Rtp1Q8C8C1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.64■■■□□ 2.5
Rtp1Q8C8C1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rtp1Q8C8C1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.63■■■□□ 2.49
Rtp1Q8C8C1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Rtp1Q8C8C1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.61■■■□□ 2.49
Rtp1Q8C8C1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.6■■■□□ 2.49
Rtp1Q8C8C1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Rtp1Q8C8C1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtp1Q8C8C1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.56■■■□□ 2.48
Rtp1Q8C8C1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.52■■■□□ 2.48
Rtp1Q8C8C1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Rtp1Q8C8C1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Rtp1Q8C8C1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.49■■■□□ 2.47
Rtp1Q8C8C1 Mipep-204ENSMUST00000225043 1548 ntBASIC30.48■■■□□ 2.47
Rtp1Q8C8C1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
Rtp1Q8C8C1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Rtp1Q8C8C1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rtp1Q8C8C1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.45■■■□□ 2.47
Rtp1Q8C8C1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtp1Q8C8C1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Rtp1Q8C8C1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Rtp1Q8C8C1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Rtp1Q8C8C1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rtp1Q8C8C1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.37■■■□□ 2.45
Rtp1Q8C8C1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rtp1Q8C8C1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rtp1Q8C8C1 Gm24970-201ENSMUST00000175582 82 ntBASIC30.32■■■□□ 2.44
Rtp1Q8C8C1 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.32■■■□□ 2.44
Rtp1Q8C8C1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Rtp1Q8C8C1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.31■■■□□ 2.44
Rtp1Q8C8C1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
Rtp1Q8C8C1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rtp1Q8C8C1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.26■■■□□ 2.43
Rtp1Q8C8C1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtp1Q8C8C1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rtp1Q8C8C1 Gm8503-201ENSMUST00000118131 455 ntBASIC30.24■■■□□ 2.43
Rtp1Q8C8C1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtp1Q8C8C1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rtp1Q8C8C1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Rtp1Q8C8C1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rtp1Q8C8C1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.14■■■□□ 2.41
Rtp1Q8C8C1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rtp1Q8C8C1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Rtp1Q8C8C1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.1■■■□□ 2.41
Rtp1Q8C8C1 Gm6821-201ENSMUST00000107540 542 ntBASIC30.09■■■□□ 2.41
Rtp1Q8C8C1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rtp1Q8C8C1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtp1Q8C8C1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rtp1Q8C8C1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.01■■■□□ 2.39
Rtp1Q8C8C1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.01■■■□□ 2.39
Rtp1Q8C8C1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Rtp1Q8C8C1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtp1Q8C8C1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms