Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Smg1Q8BKX6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Smg1Q8BKX6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smg1Q8BKX6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.34■■□□□ 1.33
Smg1Q8BKX6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Smg1Q8BKX6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Smg1Q8BKX6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smg1Q8BKX6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smg1Q8BKX6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smg1Q8BKX6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smg1Q8BKX6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.26■■□□□ 1.31
Smg1Q8BKX6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smg1Q8BKX6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smg1Q8BKX6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.23■■□□□ 1.31
Smg1Q8BKX6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.22■■□□□ 1.31
Smg1Q8BKX6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smg1Q8BKX6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smg1Q8BKX6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Smg1Q8BKX6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smg1Q8BKX6 Gm9397-201ENSMUST00000200125 605 ntBASIC23.16■■□□□ 1.3
Smg1Q8BKX6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Smg1Q8BKX6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Smg1Q8BKX6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.11■■□□□ 1.29
Smg1Q8BKX6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Smg1Q8BKX6 Peli2-204ENSMUST00000226513 1320 ntBASIC23.09■■□□□ 1.29
Smg1Q8BKX6 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.08■■□□□ 1.29
Smg1Q8BKX6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Smg1Q8BKX6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Smg1Q8BKX6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.06■■□□□ 1.28
Smg1Q8BKX6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Smg1Q8BKX6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.05■■□□□ 1.28
Smg1Q8BKX6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Smg1Q8BKX6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smg1Q8BKX6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Smg1Q8BKX6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.01■■□□□ 1.27
Smg1Q8BKX6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23■■□□□ 1.27
Smg1Q8BKX6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.99■■□□□ 1.27
Smg1Q8BKX6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Smg1Q8BKX6 Gm8503-201ENSMUST00000118131 455 ntBASIC22.96■■□□□ 1.27
Smg1Q8BKX6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Smg1Q8BKX6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Smg1Q8BKX6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Smg1Q8BKX6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Smg1Q8BKX6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Smg1Q8BKX6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Smg1Q8BKX6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Smg1Q8BKX6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Smg1Q8BKX6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Smg1Q8BKX6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Smg1Q8BKX6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Smg1Q8BKX6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.85■■□□□ 1.25
Smg1Q8BKX6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.85■■□□□ 1.25
Smg1Q8BKX6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.84■■□□□ 1.25
Smg1Q8BKX6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Smg1Q8BKX6 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.81■■□□□ 1.24
Smg1Q8BKX6 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.81■■□□□ 1.24
Smg1Q8BKX6 Gm24970-201ENSMUST00000175582 82 ntBASIC22.79■■□□□ 1.24
Smg1Q8BKX6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Smg1Q8BKX6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Smg1Q8BKX6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smg1Q8BKX6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Smg1Q8BKX6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Smg1Q8BKX6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.76■■□□□ 1.23
Smg1Q8BKX6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Smg1Q8BKX6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.7■■□□□ 1.23
Smg1Q8BKX6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Smg1Q8BKX6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.69■■□□□ 1.22
Smg1Q8BKX6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Smg1Q8BKX6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smg1Q8BKX6 Gm6821-201ENSMUST00000107540 542 ntBASIC22.65■■□□□ 1.22
Smg1Q8BKX6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Smg1Q8BKX6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smg1Q8BKX6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smg1Q8BKX6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.63■■□□□ 1.21
Smg1Q8BKX6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smg1Q8BKX6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smg1Q8BKX6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Smg1Q8BKX6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smg1Q8BKX6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smg1Q8BKX6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.56■■□□□ 1.2
Smg1Q8BKX6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smg1Q8BKX6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smg1Q8BKX6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Smg1Q8BKX6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smg1Q8BKX6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.48■■□□□ 1.19
Smg1Q8BKX6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.48■■□□□ 1.19
Smg1Q8BKX6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Smg1Q8BKX6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.47■■□□□ 1.19
Smg1Q8BKX6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Smg1Q8BKX6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Smg1Q8BKX6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Smg1Q8BKX6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.45■■□□□ 1.18
Smg1Q8BKX6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Smg1Q8BKX6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Smg1Q8BKX6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Smg1Q8BKX6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Smg1Q8BKX6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.41■■□□□ 1.18
Smg1Q8BKX6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Smg1Q8BKX6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Smg1Q8BKX6 Mir6538-201ENSMUST00000183713 110 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms