Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rbfox3Q8BIF2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.8■□□□□ 0.76
Rbfox3Q8BIF2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rbfox3Q8BIF2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbfox3Q8BIF2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rbfox3Q8BIF2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbfox3Q8BIF2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbfox3Q8BIF2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbfox3Q8BIF2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rbfox3Q8BIF2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbfox3Q8BIF2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbfox3Q8BIF2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbfox3Q8BIF2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbfox3Q8BIF2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.65■□□□□ 0.74
Rbfox3Q8BIF2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox3Q8BIF2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox3Q8BIF2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.62■□□□□ 0.73
Rbfox3Q8BIF2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox3Q8BIF2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.6■□□□□ 0.73
Rbfox3Q8BIF2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rbfox3Q8BIF2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rbfox3Q8BIF2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox3Q8BIF2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox3Q8BIF2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox3Q8BIF2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox3Q8BIF2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rbfox3Q8BIF2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rbfox3Q8BIF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rbfox3Q8BIF2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rbfox3Q8BIF2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rbfox3Q8BIF2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rbfox3Q8BIF2 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.53■□□□□ 0.72
Rbfox3Q8BIF2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rbfox3Q8BIF2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rbfox3Q8BIF2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rbfox3Q8BIF2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.49■□□□□ 0.71
Rbfox3Q8BIF2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox3Q8BIF2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox3Q8BIF2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox3Q8BIF2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox3Q8BIF2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rbfox3Q8BIF2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox3Q8BIF2 Gm24804-201ENSMUST00000174982 85 ntBASIC19.45■□□□□ 0.7
Rbfox3Q8BIF2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox3Q8BIF2 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.45■□□□□ 0.7
Rbfox3Q8BIF2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox3Q8BIF2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox3Q8BIF2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox3Q8BIF2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Rbfox3Q8BIF2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbfox3Q8BIF2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Rbfox3Q8BIF2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox3Q8BIF2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.4■□□□□ 0.7
Rbfox3Q8BIF2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox3Q8BIF2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.39■□□□□ 0.69
Rbfox3Q8BIF2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbfox3Q8BIF2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox3Q8BIF2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox3Q8BIF2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rbfox3Q8BIF2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox3Q8BIF2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox3Q8BIF2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox3Q8BIF2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbfox3Q8BIF2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbfox3Q8BIF2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox3Q8BIF2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox3Q8BIF2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox3Q8BIF2 Peli2-204ENSMUST00000226513 1320 ntBASIC19.34■□□□□ 0.69
Rbfox3Q8BIF2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbfox3Q8BIF2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rbfox3Q8BIF2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.31■□□□□ 0.68
Rbfox3Q8BIF2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox3Q8BIF2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox3Q8BIF2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rbfox3Q8BIF2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rbfox3Q8BIF2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox3Q8BIF2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbfox3Q8BIF2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbfox3Q8BIF2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.27■□□□□ 0.68
Rbfox3Q8BIF2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rbfox3Q8BIF2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
Rbfox3Q8BIF2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rbfox3Q8BIF2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbfox3Q8BIF2 Zxda-201ENSMUST00000117281 2621 ntBASIC19.24■□□□□ 0.67
Rbfox3Q8BIF2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rbfox3Q8BIF2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rbfox3Q8BIF2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox3Q8BIF2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox3Q8BIF2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rbfox3Q8BIF2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox3Q8BIF2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rbfox3Q8BIF2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rbfox3Q8BIF2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbfox3Q8BIF2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rbfox3Q8BIF2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbfox3Q8BIF2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbfox3Q8BIF2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbfox3Q8BIF2 Gm16148-201ENSMUST00000119653 893 ntBASIC19.19■□□□□ 0.66
Rbfox3Q8BIF2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rbfox3Q8BIF2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms