Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.68■■■□□ 2.02
Tnrc18Q80WC3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.68■■■□□ 2.02
Tnrc18Q80WC3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tnrc18Q80WC3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tnrc18Q80WC3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tnrc18Q80WC3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Tnrc18Q80WC3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tnrc18Q80WC3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Tnrc18Q80WC3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
Tnrc18Q80WC3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Tnrc18Q80WC3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.61■■■□□ 2.01
Tnrc18Q80WC3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Tnrc18Q80WC3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Tnrc18Q80WC3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Tnrc18Q80WC3 Gm9397-201ENSMUST00000200125 605 ntBASIC27.57■■■□□ 2
Tnrc18Q80WC3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Tnrc18Q80WC3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.55■■■□□ 2
Tnrc18Q80WC3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.54■■■□□ 2
Tnrc18Q80WC3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Tnrc18Q80WC3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Tnrc18Q80WC3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tnrc18Q80WC3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tnrc18Q80WC3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Tnrc18Q80WC3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Tnrc18Q80WC3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Tnrc18Q80WC3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.44■■□□□ 1.98
Tnrc18Q80WC3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Tnrc18Q80WC3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Tnrc18Q80WC3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Tnrc18Q80WC3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tnrc18Q80WC3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tnrc18Q80WC3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.41■■□□□ 1.98
Tnrc18Q80WC3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
Tnrc18Q80WC3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.4■■□□□ 1.98
Tnrc18Q80WC3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.39■■□□□ 1.98
Tnrc18Q80WC3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.37■■□□□ 1.97
Tnrc18Q80WC3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tnrc18Q80WC3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Tnrc18Q80WC3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Tnrc18Q80WC3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.34■■□□□ 1.97
Tnrc18Q80WC3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tnrc18Q80WC3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Tnrc18Q80WC3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Tnrc18Q80WC3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.3■■□□□ 1.96
Tnrc18Q80WC3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.3■■□□□ 1.96
Tnrc18Q80WC3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tnrc18Q80WC3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Tnrc18Q80WC3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tnrc18Q80WC3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Tnrc18Q80WC3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.28■■□□□ 1.96
Tnrc18Q80WC3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Tnrc18Q80WC3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Tnrc18Q80WC3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Tnrc18Q80WC3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Tnrc18Q80WC3 Gm24970-201ENSMUST00000175582 82 ntBASIC27.19■■□□□ 1.94
Tnrc18Q80WC3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Tnrc18Q80WC3 Mipep-204ENSMUST00000225043 1548 ntBASIC27.17■■□□□ 1.94
Tnrc18Q80WC3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Tnrc18Q80WC3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tnrc18Q80WC3 Gm8503-201ENSMUST00000118131 455 ntBASIC27.15■■□□□ 1.94
Tnrc18Q80WC3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.11■■□□□ 1.93
Tnrc18Q80WC3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.1■■□□□ 1.93
Tnrc18Q80WC3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.07■■□□□ 1.92
Tnrc18Q80WC3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Tnrc18Q80WC3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.03■■□□□ 1.92
Tnrc18Q80WC3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Tnrc18Q80WC3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.02■■□□□ 1.92
Tnrc18Q80WC3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Tnrc18Q80WC3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Tnrc18Q80WC3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Tnrc18Q80WC3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.95■■□□□ 1.9
Tnrc18Q80WC3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Tnrc18Q80WC3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Tnrc18Q80WC3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tnrc18Q80WC3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Tnrc18Q80WC3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tnrc18Q80WC3 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.9■■□□□ 1.9
Tnrc18Q80WC3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Tnrc18Q80WC3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.86■■□□□ 1.89
Tnrc18Q80WC3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Tnrc18Q80WC3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Tnrc18Q80WC3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tnrc18Q80WC3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tnrc18Q80WC3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Tnrc18Q80WC3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Tnrc18Q80WC3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Tnrc18Q80WC3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Tnrc18Q80WC3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.74■■□□□ 1.87
Tnrc18Q80WC3 Gm6821-201ENSMUST00000107540 542 ntBASIC26.7■■□□□ 1.87
Tnrc18Q80WC3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tnrc18Q80WC3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tnrc18Q80WC3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.64■■□□□ 1.86
Tnrc18Q80WC3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms