Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Peli2-204ENSMUST00000226513 1320 ntBASIC18.94■□□□□ 0.62
Csmd3Q80T79 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Csmd3Q80T79 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Csmd3Q80T79 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.91■□□□□ 0.62
Csmd3Q80T79 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Csmd3Q80T79 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Csmd3Q80T79 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Csmd3Q80T79 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Csmd3Q80T79 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.86■□□□□ 0.61
Csmd3Q80T79 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Csmd3Q80T79 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Csmd3Q80T79 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Csmd3Q80T79 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Csmd3Q80T79 Gm9397-201ENSMUST00000200125 605 ntBASIC18.84■□□□□ 0.61
Csmd3Q80T79 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Csmd3Q80T79 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Csmd3Q80T79 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Csmd3Q80T79 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Csmd3Q80T79 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Csmd3Q80T79 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.83■□□□□ 0.6
Csmd3Q80T79 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Csmd3Q80T79 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.8■□□□□ 0.6
Csmd3Q80T79 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Csmd3Q80T79 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.79■□□□□ 0.6
Csmd3Q80T79 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Csmd3Q80T79 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Csmd3Q80T79 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Csmd3Q80T79 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.78■□□□□ 0.6
Csmd3Q80T79 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Csmd3Q80T79 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Csmd3Q80T79 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Csmd3Q80T79 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Csmd3Q80T79 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Csmd3Q80T79 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.75■□□□□ 0.59
Csmd3Q80T79 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Csmd3Q80T79 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.74■□□□□ 0.59
Csmd3Q80T79 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Csmd3Q80T79 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Csmd3Q80T79 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Csmd3Q80T79 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Csmd3Q80T79 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.69■□□□□ 0.58
Csmd3Q80T79 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.67■□□□□ 0.58
Csmd3Q80T79 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Csmd3Q80T79 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Csmd3Q80T79 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Csmd3Q80T79 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Csmd3Q80T79 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Csmd3Q80T79 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.63■□□□□ 0.57
Csmd3Q80T79 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Csmd3Q80T79 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Csmd3Q80T79 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Csmd3Q80T79 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Csmd3Q80T79 Gm24970-201ENSMUST00000175582 82 ntBASIC18.59■□□□□ 0.57
Csmd3Q80T79 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Csmd3Q80T79 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Csmd3Q80T79 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.57■□□□□ 0.56
Csmd3Q80T79 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.57■□□□□ 0.56
Csmd3Q80T79 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Csmd3Q80T79 Gm8503-201ENSMUST00000118131 455 ntBASIC18.54■□□□□ 0.56
Csmd3Q80T79 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Csmd3Q80T79 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Csmd3Q80T79 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Csmd3Q80T79 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Csmd3Q80T79 Mipep-204ENSMUST00000225043 1548 ntBASIC18.49■□□□□ 0.55
Csmd3Q80T79 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.48■□□□□ 0.55
Csmd3Q80T79 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Csmd3Q80T79 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Csmd3Q80T79 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Csmd3Q80T79 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.45■□□□□ 0.54
Csmd3Q80T79 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.45■□□□□ 0.54
Csmd3Q80T79 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Csmd3Q80T79 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Csmd3Q80T79 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Csmd3Q80T79 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.42■□□□□ 0.54
Csmd3Q80T79 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Csmd3Q80T79 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.41■□□□□ 0.54
Csmd3Q80T79 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Csmd3Q80T79 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Csmd3Q80T79 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Csmd3Q80T79 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.35■□□□□ 0.53
Csmd3Q80T79 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Csmd3Q80T79 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csmd3Q80T79 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Csmd3Q80T79 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Csmd3Q80T79 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Csmd3Q80T79 Gm6821-201ENSMUST00000107540 542 ntBASIC18.29■□□□□ 0.52
Csmd3Q80T79 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Csmd3Q80T79 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Csmd3Q80T79 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Csmd3Q80T79 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Csmd3Q80T79 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Csmd3Q80T79 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Csmd3Q80T79 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
Csmd3Q80T79 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Csmd3Q80T79 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Csmd3Q80T79 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Csmd3Q80T79 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
Csmd3Q80T79 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Csmd3Q80T79 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Csmd3Q80T79 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms