Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.29■■■□□ 2.76
Kdm3aQ6PCM1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Kdm3aQ6PCM1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Kdm3aQ6PCM1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Kdm3aQ6PCM1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Kdm3aQ6PCM1 Peli2-204ENSMUST00000226513 1320 ntBASIC32.25■■■□□ 2.75
Kdm3aQ6PCM1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Kdm3aQ6PCM1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Kdm3aQ6PCM1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Kdm3aQ6PCM1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Kdm3aQ6PCM1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Kdm3aQ6PCM1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Kdm3aQ6PCM1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Kdm3aQ6PCM1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Kdm3aQ6PCM1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Kdm3aQ6PCM1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Kdm3aQ6PCM1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Kdm3aQ6PCM1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.08■■■□□ 2.73
Kdm3aQ6PCM1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Kdm3aQ6PCM1 Gm16148-201ENSMUST00000119653 893 ntBASIC32.07■■■□□ 2.72
Kdm3aQ6PCM1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Kdm3aQ6PCM1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Kdm3aQ6PCM1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Kdm3aQ6PCM1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.01■■■□□ 2.71
Kdm3aQ6PCM1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Kdm3aQ6PCM1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Kdm3aQ6PCM1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Kdm3aQ6PCM1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Kdm3aQ6PCM1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.97■■■□□ 2.71
Kdm3aQ6PCM1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Kdm3aQ6PCM1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Kdm3aQ6PCM1 Zfp131-205ENSMUST00000223812 663 ntBASIC31.96■■■□□ 2.71
Kdm3aQ6PCM1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Kdm3aQ6PCM1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Kdm3aQ6PCM1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
Kdm3aQ6PCM1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Kdm3aQ6PCM1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Kdm3aQ6PCM1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Kdm3aQ6PCM1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Kdm3aQ6PCM1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.82■■■□□ 2.68
Kdm3aQ6PCM1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Kdm3aQ6PCM1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Kdm3aQ6PCM1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Kdm3aQ6PCM1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Kdm3aQ6PCM1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Kdm3aQ6PCM1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Kdm3aQ6PCM1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.68
Kdm3aQ6PCM1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Kdm3aQ6PCM1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Kdm3aQ6PCM1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Kdm3aQ6PCM1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
Kdm3aQ6PCM1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Kdm3aQ6PCM1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Kdm3aQ6PCM1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Kdm3aQ6PCM1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Kdm3aQ6PCM1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.65■■■□□ 2.66
Kdm3aQ6PCM1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Kdm3aQ6PCM1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Kdm3aQ6PCM1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.62■■■□□ 2.65
Kdm3aQ6PCM1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.61■■■□□ 2.65
Kdm3aQ6PCM1 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.61■■■□□ 2.65
Kdm3aQ6PCM1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm3aQ6PCM1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm3aQ6PCM1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Kdm3aQ6PCM1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.56■■■□□ 2.64
Kdm3aQ6PCM1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm3aQ6PCM1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm3aQ6PCM1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Kdm3aQ6PCM1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm3aQ6PCM1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm3aQ6PCM1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm3aQ6PCM1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Kdm3aQ6PCM1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.51■■■□□ 2.64
Kdm3aQ6PCM1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
Kdm3aQ6PCM1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Kdm3aQ6PCM1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Kdm3aQ6PCM1 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.47■■■□□ 2.63
Kdm3aQ6PCM1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.46■■■□□ 2.63
Kdm3aQ6PCM1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Kdm3aQ6PCM1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
Kdm3aQ6PCM1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Kdm3aQ6PCM1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kdm3aQ6PCM1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.44■■■□□ 2.62
Kdm3aQ6PCM1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Kdm3aQ6PCM1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.41■■■□□ 2.62
Kdm3aQ6PCM1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.4■■■□□ 2.62
Kdm3aQ6PCM1 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.4■■■□□ 2.62
Kdm3aQ6PCM1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.38■■■□□ 2.61
Kdm3aQ6PCM1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Kdm3aQ6PCM1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm3aQ6PCM1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm3aQ6PCM1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Kdm3aQ6PCM1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Kdm3aQ6PCM1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Kdm3aQ6PCM1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.32■■■□□ 2.6
Kdm3aQ6PCM1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Kdm3aQ6PCM1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Kdm3aQ6PCM1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm3aQ6PCM1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Kdm3aQ6PCM1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms