Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CNKSR3Q6P9H4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
CNKSR3Q6P9H4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CNKSR3Q6P9H4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CNKSR3Q6P9H4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.77■■■□□ 2.52
CNKSR3Q6P9H4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.75■■■□□ 2.51
CNKSR3Q6P9H4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CNKSR3Q6P9H4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.74■■■□□ 2.51
CNKSR3Q6P9H4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CNKSR3Q6P9H4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CNKSR3Q6P9H4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.71■■■□□ 2.51
CNKSR3Q6P9H4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
CNKSR3Q6P9H4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CNKSR3Q6P9H4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.69■■■□□ 2.5
CNKSR3Q6P9H4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CNKSR3Q6P9H4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.68■■■□□ 2.5
CNKSR3Q6P9H4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CNKSR3Q6P9H4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CNKSR3Q6P9H4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.65■■■□□ 2.5
CNKSR3Q6P9H4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CNKSR3Q6P9H4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.64■■■□□ 2.5
CNKSR3Q6P9H4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.62■■■□□ 2.49
CNKSR3Q6P9H4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CNKSR3Q6P9H4 MIR3665-201ENST00000578708 105 ntBASIC30.61■■■□□ 2.49
CNKSR3Q6P9H4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.61■■■□□ 2.49
CNKSR3Q6P9H4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CNKSR3Q6P9H4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
CNKSR3Q6P9H4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.58■■■□□ 2.49
CNKSR3Q6P9H4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CNKSR3Q6P9H4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.56■■■□□ 2.48
CNKSR3Q6P9H4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.53■■■□□ 2.48
CNKSR3Q6P9H4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
CNKSR3Q6P9H4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CNKSR3Q6P9H4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CNKSR3Q6P9H4 ABHD17AP4-201ENST00000411545 909 ntBASIC30.47■■■□□ 2.47
CNKSR3Q6P9H4 AC087741.3-201ENST00000624270 1347 ntBASIC30.47■■■□□ 2.47
CNKSR3Q6P9H4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CNKSR3Q6P9H4 DUX4L28-201ENST00000623687 678 ntBASIC30.45■■■□□ 2.47
CNKSR3Q6P9H4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CNKSR3Q6P9H4 MIR7108-201ENST00000614319 87 ntBASIC30.44■■■□□ 2.46
CNKSR3Q6P9H4 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.43■■■□□ 2.46
CNKSR3Q6P9H4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.42■■■□□ 2.46
CNKSR3Q6P9H4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CNKSR3Q6P9H4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CNKSR3Q6P9H4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CNKSR3Q6P9H4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.41■■■□□ 2.46
CNKSR3Q6P9H4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CNKSR3Q6P9H4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.4■■■□□ 2.46
CNKSR3Q6P9H4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.4■■■□□ 2.46
CNKSR3Q6P9H4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CNKSR3Q6P9H4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CNKSR3Q6P9H4 MIR762-201ENST00000390236 83 ntBASIC30.39■■■□□ 2.46
CNKSR3Q6P9H4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CNKSR3Q6P9H4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CNKSR3Q6P9H4 AC044849.2-201ENST00000606596 710 ntBASIC30.36■■■□□ 2.45
CNKSR3Q6P9H4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.36■■■□□ 2.45
CNKSR3Q6P9H4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CNKSR3Q6P9H4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
CNKSR3Q6P9H4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.34■■■□□ 2.45
CNKSR3Q6P9H4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CNKSR3Q6P9H4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CNKSR3Q6P9H4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CNKSR3Q6P9H4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.33■■■□□ 2.45
CNKSR3Q6P9H4 AC005559.1-201ENST00000589661 871 ntBASIC30.33■■■□□ 2.45
CNKSR3Q6P9H4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
CNKSR3Q6P9H4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CNKSR3Q6P9H4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
CNKSR3Q6P9H4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CNKSR3Q6P9H4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CNKSR3Q6P9H4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
CNKSR3Q6P9H4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.27■■■□□ 2.44
CNKSR3Q6P9H4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.26■■■□□ 2.43
CNKSR3Q6P9H4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.25■■■□□ 2.43
CNKSR3Q6P9H4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
CNKSR3Q6P9H4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.22■■■□□ 2.43
CNKSR3Q6P9H4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CNKSR3Q6P9H4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CNKSR3Q6P9H4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CNKSR3Q6P9H4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CNKSR3Q6P9H4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.19■■■□□ 2.42
CNKSR3Q6P9H4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.18■■■□□ 2.42
CNKSR3Q6P9H4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CNKSR3Q6P9H4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CNKSR3Q6P9H4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CNKSR3Q6P9H4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.17■■■□□ 2.42
CNKSR3Q6P9H4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CNKSR3Q6P9H4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.15■■■□□ 2.42
CNKSR3Q6P9H4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.42
CNKSR3Q6P9H4 HLA-V-202ENST00000446817 847 ntBASIC30.12■■■□□ 2.41
CNKSR3Q6P9H4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.11■■■□□ 2.41
CNKSR3Q6P9H4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CNKSR3Q6P9H4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.1■■■□□ 2.41
CNKSR3Q6P9H4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CNKSR3Q6P9H4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CNKSR3Q6P9H4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.09■■■□□ 2.41
CNKSR3Q6P9H4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.09■■■□□ 2.41
CNKSR3Q6P9H4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.09■■■□□ 2.41
CNKSR3Q6P9H4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CNKSR3Q6P9H4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CNKSR3Q6P9H4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms