Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.68■■■□□ 2.66
CCDC62Q6P9F0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
CCDC62Q6P9F0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC62Q6P9F0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC62Q6P9F0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC62Q6P9F0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.64■■■□□ 2.65
CCDC62Q6P9F0 AL133380.1-201ENST00000506013 324 ntBASIC31.62■■■□□ 2.65
CCDC62Q6P9F0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.62■■■□□ 2.65
CCDC62Q6P9F0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.62■■■□□ 2.65
CCDC62Q6P9F0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC62Q6P9F0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC62Q6P9F0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
CCDC62Q6P9F0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC62Q6P9F0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC62Q6P9F0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC62Q6P9F0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CCDC62Q6P9F0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC62Q6P9F0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CCDC62Q6P9F0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC62Q6P9F0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC62Q6P9F0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC62Q6P9F0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CCDC62Q6P9F0 AL391121.1-201ENST00000607967 1349 ntBASIC31.52■■■□□ 2.64
CCDC62Q6P9F0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC62Q6P9F0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.47■■■□□ 2.63
CCDC62Q6P9F0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCDC62Q6P9F0 RPS2P35-201ENST00000443417 897 ntBASIC31.46■■■□□ 2.63
CCDC62Q6P9F0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CCDC62Q6P9F0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.43■■■□□ 2.62
CCDC62Q6P9F0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.42■■■□□ 2.62
CCDC62Q6P9F0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCDC62Q6P9F0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCDC62Q6P9F0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCDC62Q6P9F0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.38■■■□□ 2.61
CCDC62Q6P9F0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CCDC62Q6P9F0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC62Q6P9F0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCDC62Q6P9F0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CCDC62Q6P9F0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.32■■■□□ 2.6
CCDC62Q6P9F0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.3■■■□□ 2.6
CCDC62Q6P9F0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.3■■■□□ 2.6
CCDC62Q6P9F0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.27■■■□□ 2.6
CCDC62Q6P9F0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC62Q6P9F0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC62Q6P9F0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CCDC62Q6P9F0 AL162393.1-201ENST00000437852 946 ntBASIC31.26■■■□□ 2.59
CCDC62Q6P9F0 AP006261.1-201ENST00000584783 668 ntBASIC31.24■■■□□ 2.59
CCDC62Q6P9F0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC62Q6P9F0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.22■■■□□ 2.59
CCDC62Q6P9F0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.21■■■□□ 2.59
CCDC62Q6P9F0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC62Q6P9F0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC62Q6P9F0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC62Q6P9F0 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.2■■■□□ 2.58
CCDC62Q6P9F0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC62Q6P9F0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.15■■■□□ 2.58
CCDC62Q6P9F0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC62Q6P9F0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC62Q6P9F0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
CCDC62Q6P9F0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC62Q6P9F0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.11■■■□□ 2.57
CCDC62Q6P9F0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC62Q6P9F0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.09■■■□□ 2.57
CCDC62Q6P9F0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC62Q6P9F0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
CCDC62Q6P9F0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC62Q6P9F0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC62Q6P9F0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
CCDC62Q6P9F0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC62Q6P9F0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC62Q6P9F0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC62Q6P9F0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.04■■■□□ 2.56
CCDC62Q6P9F0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC62Q6P9F0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC62Q6P9F0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CCDC62Q6P9F0 MIR3665-201ENST00000578708 105 ntBASIC31.01■■■□□ 2.55
CCDC62Q6P9F0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31■■■□□ 2.55
CCDC62Q6P9F0 CHML-205ENST00000638160 705 ntTSL 3 BASIC31■■■□□ 2.55
CCDC62Q6P9F0 MIR762-201ENST00000390236 83 ntBASIC30.99■■■□□ 2.55
CCDC62Q6P9F0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC62Q6P9F0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CCDC62Q6P9F0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CCDC62Q6P9F0 DUX4L28-201ENST00000623687 678 ntBASIC30.97■■■□□ 2.55
CCDC62Q6P9F0 WASH5P-204ENST00000632292 975 ntBASIC30.97■■■□□ 2.55
CCDC62Q6P9F0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
CCDC62Q6P9F0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CCDC62Q6P9F0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CCDC62Q6P9F0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.93■■■□□ 2.54
CCDC62Q6P9F0 AC087741.3-201ENST00000624270 1347 ntBASIC30.92■■■□□ 2.54
CCDC62Q6P9F0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.91■■■□□ 2.54
CCDC62Q6P9F0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCDC62Q6P9F0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.53
CCDC62Q6P9F0 AC005559.1-201ENST00000589661 871 ntBASIC30.87■■■□□ 2.53
CCDC62Q6P9F0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.87■■■□□ 2.53
CCDC62Q6P9F0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCDC62Q6P9F0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.86■■■□□ 2.53
CCDC62Q6P9F0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CCDC62Q6P9F0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC62Q6P9F0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CCDC62Q6P9F0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms