Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Krt40Q6IFX3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Krt40Q6IFX3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Krt40Q6IFX3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.64■■■□□ 2.66
Krt40Q6IFX3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Krt40Q6IFX3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Krt40Q6IFX3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
Krt40Q6IFX3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Krt40Q6IFX3 Zfp131-205ENSMUST00000223812 663 ntBASIC31.56■■■□□ 2.64
Krt40Q6IFX3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Krt40Q6IFX3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Krt40Q6IFX3 Gm16148-201ENSMUST00000119653 893 ntBASIC31.54■■■□□ 2.64
Krt40Q6IFX3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Krt40Q6IFX3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Krt40Q6IFX3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Krt40Q6IFX3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Krt40Q6IFX3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Krt40Q6IFX3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Krt40Q6IFX3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Krt40Q6IFX3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Krt40Q6IFX3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Krt40Q6IFX3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.44■■■□□ 2.62
Krt40Q6IFX3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Krt40Q6IFX3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Krt40Q6IFX3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Krt40Q6IFX3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Krt40Q6IFX3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Krt40Q6IFX3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Krt40Q6IFX3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Krt40Q6IFX3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
Krt40Q6IFX3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
Krt40Q6IFX3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Krt40Q6IFX3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.28■■■□□ 2.6
Krt40Q6IFX3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Krt40Q6IFX3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Krt40Q6IFX3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.27■■■□□ 2.6
Krt40Q6IFX3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.26■■■□□ 2.6
Krt40Q6IFX3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
Krt40Q6IFX3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Krt40Q6IFX3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Krt40Q6IFX3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Krt40Q6IFX3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Krt40Q6IFX3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.22■■■□□ 2.59
Krt40Q6IFX3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
Krt40Q6IFX3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Krt40Q6IFX3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Krt40Q6IFX3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Krt40Q6IFX3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Krt40Q6IFX3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.12■■■□□ 2.57
Krt40Q6IFX3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Krt40Q6IFX3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Krt40Q6IFX3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Krt40Q6IFX3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Krt40Q6IFX3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Krt40Q6IFX3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Krt40Q6IFX3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Krt40Q6IFX3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
Krt40Q6IFX3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31■■■□□ 2.55
Krt40Q6IFX3 Tdp2-203ENSMUST00000223804 1136 ntBASIC31■■■□□ 2.55
Krt40Q6IFX3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Krt40Q6IFX3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Krt40Q6IFX3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.98■■■□□ 2.55
Krt40Q6IFX3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.97■■■□□ 2.55
Krt40Q6IFX3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Krt40Q6IFX3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
Krt40Q6IFX3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Krt40Q6IFX3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.93■■■□□ 2.54
Krt40Q6IFX3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Krt40Q6IFX3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Krt40Q6IFX3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Krt40Q6IFX3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Krt40Q6IFX3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Krt40Q6IFX3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Krt40Q6IFX3 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.88■■■□□ 2.53
Krt40Q6IFX3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.87■■■□□ 2.53
Krt40Q6IFX3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Krt40Q6IFX3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.86■■■□□ 2.53
Krt40Q6IFX3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Krt40Q6IFX3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Krt40Q6IFX3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Krt40Q6IFX3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Krt40Q6IFX3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Krt40Q6IFX3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.78■■■□□ 2.52
Krt40Q6IFX3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Krt40Q6IFX3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Krt40Q6IFX3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Krt40Q6IFX3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Krt40Q6IFX3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Krt40Q6IFX3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Krt40Q6IFX3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Krt40Q6IFX3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.71■■■□□ 2.51
Krt40Q6IFX3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.7■■■□□ 2.51
Krt40Q6IFX3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Krt40Q6IFX3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Krt40Q6IFX3 Gm9397-201ENSMUST00000200125 605 ntBASIC30.66■■■□□ 2.5
Krt40Q6IFX3 Gm45855-201ENSMUST00000212546 880 ntBASIC30.66■■■□□ 2.5
Krt40Q6IFX3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.66■■■□□ 2.5
Krt40Q6IFX3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Krt40Q6IFX3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Krt40Q6IFX3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms