Protein–RNA interactions for Protein: Q68D20

PMS2CL, Protein PMS2CL, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CLQ68D20 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
PMS2CLQ68D20 AL133380.1-201ENST00000506013 324 ntBASIC28.16■■■□□ 2.1
PMS2CLQ68D20 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PMS2CLQ68D20 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PMS2CLQ68D20 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.12■■■□□ 2.09
PMS2CLQ68D20 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PMS2CLQ68D20 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.11■■■□□ 2.09
PMS2CLQ68D20 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PMS2CLQ68D20 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.11■■■□□ 2.09
PMS2CLQ68D20 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PMS2CLQ68D20 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PMS2CLQ68D20 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
PMS2CLQ68D20 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PMS2CLQ68D20 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.02■■■□□ 2.08
PMS2CLQ68D20 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.01■■■□□ 2.07
PMS2CLQ68D20 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28■■■□□ 2.07
PMS2CLQ68D20 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28■■■□□ 2.07
PMS2CLQ68D20 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28■■■□□ 2.07
PMS2CLQ68D20 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PMS2CLQ68D20 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
PMS2CLQ68D20 MIR3665-201ENST00000578708 105 ntBASIC27.98■■■□□ 2.07
PMS2CLQ68D20 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
PMS2CLQ68D20 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.95■■■□□ 2.06
PMS2CLQ68D20 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.95■■■□□ 2.06
PMS2CLQ68D20 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PMS2CLQ68D20 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PMS2CLQ68D20 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PMS2CLQ68D20 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.92■■■□□ 2.06
PMS2CLQ68D20 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.91■■■□□ 2.06
PMS2CLQ68D20 ABHD17AP4-201ENST00000411545 909 ntBASIC27.9■■■□□ 2.06
PMS2CLQ68D20 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PMS2CLQ68D20 MIR7108-201ENST00000614319 87 ntBASIC27.89■■■□□ 2.06
PMS2CLQ68D20 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PMS2CLQ68D20 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PMS2CLQ68D20 AC087741.3-201ENST00000624270 1347 ntBASIC27.86■■■□□ 2.05
PMS2CLQ68D20 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PMS2CLQ68D20 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PMS2CLQ68D20 DUX4L28-201ENST00000623687 678 ntBASIC27.83■■■□□ 2.05
PMS2CLQ68D20 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.82■■■□□ 2.04
PMS2CLQ68D20 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.79■■■□□ 2.04
PMS2CLQ68D20 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.79■■■□□ 2.04
PMS2CLQ68D20 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PMS2CLQ68D20 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PMS2CLQ68D20 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.76■■■□□ 2.03
PMS2CLQ68D20 AC044849.2-201ENST00000606596 710 ntBASIC27.76■■■□□ 2.03
PMS2CLQ68D20 MIR762-201ENST00000390236 83 ntBASIC27.75■■■□□ 2.03
PMS2CLQ68D20 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
PMS2CLQ68D20 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
PMS2CLQ68D20 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PMS2CLQ68D20 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.74■■■□□ 2.03
PMS2CLQ68D20 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.74■■■□□ 2.03
PMS2CLQ68D20 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PMS2CLQ68D20 AC005559.1-201ENST00000589661 871 ntBASIC27.7■■■□□ 2.02
PMS2CLQ68D20 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PMS2CLQ68D20 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.68■■■□□ 2.02
PMS2CLQ68D20 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
PMS2CLQ68D20 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.67■■■□□ 2.02
PMS2CLQ68D20 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PMS2CLQ68D20 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.65■■■□□ 2.02
PMS2CLQ68D20 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.64■■■□□ 2.02
PMS2CLQ68D20 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PMS2CLQ68D20 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
PMS2CLQ68D20 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PMS2CLQ68D20 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.63■■■□□ 2.01
PMS2CLQ68D20 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PMS2CLQ68D20 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.62■■■□□ 2.01
PMS2CLQ68D20 HLA-V-202ENST00000446817 847 ntBASIC27.61■■■□□ 2.01
PMS2CLQ68D20 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.61■■■□□ 2.01
PMS2CLQ68D20 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.61■■■□□ 2.01
PMS2CLQ68D20 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.61■■■□□ 2.01
PMS2CLQ68D20 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
PMS2CLQ68D20 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
PMS2CLQ68D20 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.6■■■□□ 2.01
PMS2CLQ68D20 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
PMS2CLQ68D20 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.59■■■□□ 2.01
PMS2CLQ68D20 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PMS2CLQ68D20 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PMS2CLQ68D20 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PMS2CLQ68D20 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
PMS2CLQ68D20 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.55■■■□□ 2
PMS2CLQ68D20 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.54■■■□□ 2
PMS2CLQ68D20 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
PMS2CLQ68D20 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.52■■■□□ 2
PMS2CLQ68D20 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.52■■■□□ 2
PMS2CLQ68D20 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PMS2CLQ68D20 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
PMS2CLQ68D20 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.51■■□□□ 1.99
PMS2CLQ68D20 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.5■■□□□ 1.99
PMS2CLQ68D20 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
PMS2CLQ68D20 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.49■■□□□ 1.99
PMS2CLQ68D20 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PMS2CLQ68D20 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PMS2CLQ68D20 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.48■■□□□ 1.99
PMS2CLQ68D20 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PMS2CLQ68D20 ZNRF2P2-203ENST00000454624 420 ntBASIC27.47■■□□□ 1.99
PMS2CLQ68D20 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.41■■□□□ 1.98
PMS2CLQ68D20 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PMS2CLQ68D20 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.4■■□□□ 1.98
PMS2CLQ68D20 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.39■■□□□ 1.98
PMS2CLQ68D20 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms