Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Foxn1Q61575 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Foxn1Q61575 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Foxn1Q61575 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Foxn1Q61575 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Foxn1Q61575 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Foxn1Q61575 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Foxn1Q61575 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.31■■■□□ 2.6
Foxn1Q61575 Gm9397-201ENSMUST00000200125 605 ntBASIC31.31■■■□□ 2.6
Foxn1Q61575 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Foxn1Q61575 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Foxn1Q61575 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Foxn1Q61575 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Foxn1Q61575 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
Foxn1Q61575 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Foxn1Q61575 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Foxn1Q61575 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Foxn1Q61575 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.21■■■□□ 2.59
Foxn1Q61575 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Foxn1Q61575 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Foxn1Q61575 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Foxn1Q61575 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.16■■■□□ 2.58
Foxn1Q61575 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
Foxn1Q61575 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Foxn1Q61575 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Foxn1Q61575 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Foxn1Q61575 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.15■■■□□ 2.58
Foxn1Q61575 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Foxn1Q61575 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Foxn1Q61575 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.14■■■□□ 2.58
Foxn1Q61575 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Foxn1Q61575 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
Foxn1Q61575 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.09■■■□□ 2.57
Foxn1Q61575 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Foxn1Q61575 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Foxn1Q61575 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.04■■■□□ 2.56
Foxn1Q61575 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Foxn1Q61575 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.01■■■□□ 2.55
Foxn1Q61575 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.97■■■□□ 2.55
Foxn1Q61575 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Foxn1Q61575 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Foxn1Q61575 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.89■■■□□ 2.54
Foxn1Q61575 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.89■■■□□ 2.54
Foxn1Q61575 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.89■■■□□ 2.53
Foxn1Q61575 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Foxn1Q61575 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Foxn1Q61575 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Foxn1Q61575 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Foxn1Q61575 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.82■■■□□ 2.52
Foxn1Q61575 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.82■■■□□ 2.52
Foxn1Q61575 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Foxn1Q61575 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Foxn1Q61575 Gm8503-201ENSMUST00000118131 455 ntBASIC30.79■■■□□ 2.52
Foxn1Q61575 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.78■■■□□ 2.52
Foxn1Q61575 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Foxn1Q61575 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
Foxn1Q61575 Gm24970-201ENSMUST00000175582 82 ntBASIC30.74■■■□□ 2.51
Foxn1Q61575 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Foxn1Q61575 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Foxn1Q61575 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Foxn1Q61575 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.68■■■□□ 2.5
Foxn1Q61575 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Foxn1Q61575 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.68■■■□□ 2.5
Foxn1Q61575 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Foxn1Q61575 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Foxn1Q61575 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Foxn1Q61575 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Foxn1Q61575 Mipep-204ENSMUST00000225043 1548 ntBASIC30.57■■■□□ 2.48
Foxn1Q61575 Gm6821-201ENSMUST00000107540 542 ntBASIC30.56■■■□□ 2.48
Foxn1Q61575 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Foxn1Q61575 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
Foxn1Q61575 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.45■■■□□ 2.47
Foxn1Q61575 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Foxn1Q61575 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Foxn1Q61575 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Foxn1Q61575 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Foxn1Q61575 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.39■■■□□ 2.46
Foxn1Q61575 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Foxn1Q61575 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Foxn1Q61575 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Foxn1Q61575 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Foxn1Q61575 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Foxn1Q61575 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Foxn1Q61575 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.31■■■□□ 2.44
Foxn1Q61575 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Foxn1Q61575 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Foxn1Q61575 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.25■■■□□ 2.43
Foxn1Q61575 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Foxn1Q61575 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.23■■■□□ 2.43
Foxn1Q61575 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Foxn1Q61575 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Foxn1Q61575 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.17■■■□□ 2.42
Foxn1Q61575 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Foxn1Q61575 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Foxn1Q61575 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Foxn1Q61575 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Foxn1Q61575 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Foxn1Q61575 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Foxn1Q61575 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Foxn1Q61575 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms