Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.61■■□□□ 1.21
LDLRAD2Q5SZI1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LDLRAD2Q5SZI1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LDLRAD2Q5SZI1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LDLRAD2Q5SZI1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LDLRAD2Q5SZI1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LDLRAD2Q5SZI1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LDLRAD2Q5SZI1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.55■■□□□ 1.2
LDLRAD2Q5SZI1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LDLRAD2Q5SZI1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.53■■□□□ 1.2
LDLRAD2Q5SZI1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 RARRES2P7-201ENST00000567349 469 ntBASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LDLRAD2Q5SZI1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.51■■□□□ 1.19
LDLRAD2Q5SZI1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LDLRAD2Q5SZI1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LDLRAD2Q5SZI1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LDLRAD2Q5SZI1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.48■■□□□ 1.19
LDLRAD2Q5SZI1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LDLRAD2Q5SZI1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.47■■□□□ 1.19
LDLRAD2Q5SZI1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LDLRAD2Q5SZI1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.46■■□□□ 1.19
LDLRAD2Q5SZI1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
LDLRAD2Q5SZI1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 SETD8P1-201ENST00000623146 1180 ntBASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LDLRAD2Q5SZI1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.41■■□□□ 1.18
LDLRAD2Q5SZI1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.4■■□□□ 1.18
LDLRAD2Q5SZI1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.39■■□□□ 1.17
LDLRAD2Q5SZI1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 AC136428.2-201ENST00000563187 214 ntBASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.36■■□□□ 1.17
LDLRAD2Q5SZI1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LDLRAD2Q5SZI1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.35■■□□□ 1.17
LDLRAD2Q5SZI1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 AL133380.1-201ENST00000506013 324 ntBASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LDLRAD2Q5SZI1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.32■■□□□ 1.16
LDLRAD2Q5SZI1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 AC097358.2-201ENST00000607541 1159 ntBASIC22.31■■□□□ 1.16
LDLRAD2Q5SZI1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.3■■□□□ 1.16
LDLRAD2Q5SZI1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LDLRAD2Q5SZI1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.28■■□□□ 1.16
LDLRAD2Q5SZI1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
LDLRAD2Q5SZI1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.27■■□□□ 1.16
LDLRAD2Q5SZI1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LDLRAD2Q5SZI1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LDLRAD2Q5SZI1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.24■■□□□ 1.15
LDLRAD2Q5SZI1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LDLRAD2Q5SZI1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LDLRAD2Q5SZI1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
LDLRAD2Q5SZI1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.22■■□□□ 1.15
LDLRAD2Q5SZI1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
LDLRAD2Q5SZI1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.2■■□□□ 1.14
LDLRAD2Q5SZI1 CAHM-201ENST00000604200 896 ntBASIC22.19■■□□□ 1.14
LDLRAD2Q5SZI1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LDLRAD2Q5SZI1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LDLRAD2Q5SZI1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.18■■□□□ 1.14
LDLRAD2Q5SZI1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 AC120057.4-201ENST00000624722 1615 ntBASIC22.17■■□□□ 1.14
LDLRAD2Q5SZI1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LDLRAD2Q5SZI1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.14■■□□□ 1.13
LDLRAD2Q5SZI1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LDLRAD2Q5SZI1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 SUZ12P1-203ENST00000578195 985 ntBASIC22.13■■□□□ 1.13
LDLRAD2Q5SZI1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
LDLRAD2Q5SZI1 AL391121.1-201ENST00000607967 1349 ntBASIC22.11■■□□□ 1.13
LDLRAD2Q5SZI1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
LDLRAD2Q5SZI1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LDLRAD2Q5SZI1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LDLRAD2Q5SZI1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.08■■□□□ 1.13
LDLRAD2Q5SZI1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms