Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Khdc1aQ3UWR2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc1aQ3UWR2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Khdc1aQ3UWR2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Khdc1aQ3UWR2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Khdc1aQ3UWR2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Khdc1aQ3UWR2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc1aQ3UWR2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.23■□□□□ 0.67
Khdc1aQ3UWR2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Khdc1aQ3UWR2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc1aQ3UWR2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc1aQ3UWR2 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.23■□□□□ 0.67
Khdc1aQ3UWR2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc1aQ3UWR2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc1aQ3UWR2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc1aQ3UWR2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc1aQ3UWR2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc1aQ3UWR2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc1aQ3UWR2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc1aQ3UWR2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.17■□□□□ 0.66
Khdc1aQ3UWR2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc1aQ3UWR2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Khdc1aQ3UWR2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Khdc1aQ3UWR2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Khdc1aQ3UWR2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.14■□□□□ 0.65
Khdc1aQ3UWR2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc1aQ3UWR2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc1aQ3UWR2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
Khdc1aQ3UWR2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Khdc1aQ3UWR2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc1aQ3UWR2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Khdc1aQ3UWR2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Khdc1aQ3UWR2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Khdc1aQ3UWR2 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.1■□□□□ 0.65
Khdc1aQ3UWR2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Khdc1aQ3UWR2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Khdc1aQ3UWR2 Rab21-202ENSMUST00000218831 843 ntBASIC19.08■□□□□ 0.64
Khdc1aQ3UWR2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc1aQ3UWR2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc1aQ3UWR2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Khdc1aQ3UWR2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Khdc1aQ3UWR2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Khdc1aQ3UWR2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc1aQ3UWR2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc1aQ3UWR2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Khdc1aQ3UWR2 Zxda-201ENSMUST00000117281 2621 ntBASIC19.04■□□□□ 0.64
Khdc1aQ3UWR2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Khdc1aQ3UWR2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.04■□□□□ 0.64
Khdc1aQ3UWR2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Khdc1aQ3UWR2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Khdc1aQ3UWR2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc1aQ3UWR2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc1aQ3UWR2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc1aQ3UWR2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc1aQ3UWR2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.02■□□□□ 0.64
Khdc1aQ3UWR2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.02■□□□□ 0.64
Khdc1aQ3UWR2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Khdc1aQ3UWR2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc1aQ3UWR2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19■□□□□ 0.63
Khdc1aQ3UWR2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Khdc1aQ3UWR2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Khdc1aQ3UWR2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc1aQ3UWR2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc1aQ3UWR2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Khdc1aQ3UWR2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc1aQ3UWR2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc1aQ3UWR2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1aQ3UWR2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Khdc1aQ3UWR2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc1aQ3UWR2 Mipep-204ENSMUST00000225043 1548 ntBASIC18.96■□□□□ 0.63
Khdc1aQ3UWR2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc1aQ3UWR2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc1aQ3UWR2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.94■□□□□ 0.62
Khdc1aQ3UWR2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Khdc1aQ3UWR2 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.93■□□□□ 0.62
Khdc1aQ3UWR2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc1aQ3UWR2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc1aQ3UWR2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Khdc1aQ3UWR2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Khdc1aQ3UWR2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.92■□□□□ 0.62
Khdc1aQ3UWR2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc1aQ3UWR2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Khdc1aQ3UWR2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc1aQ3UWR2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Khdc1aQ3UWR2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc1aQ3UWR2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc1aQ3UWR2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Khdc1aQ3UWR2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Khdc1aQ3UWR2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Khdc1aQ3UWR2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc1aQ3UWR2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc1aQ3UWR2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc1aQ3UWR2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Khdc1aQ3UWR2 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.86■□□□□ 0.61
Khdc1aQ3UWR2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Khdc1aQ3UWR2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Khdc1aQ3UWR2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc1aQ3UWR2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc1aQ3UWR2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Khdc1aQ3UWR2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms