Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rnf223Q3UV31 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.88■■□□□ 1.73
Rnf223Q3UV31 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rnf223Q3UV31 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rnf223Q3UV31 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Rnf223Q3UV31 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Rnf223Q3UV31 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.85■■□□□ 1.73
Rnf223Q3UV31 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Rnf223Q3UV31 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Rnf223Q3UV31 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf223Q3UV31 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Rnf223Q3UV31 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Rnf223Q3UV31 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rnf223Q3UV31 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rnf223Q3UV31 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Rnf223Q3UV31 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Rnf223Q3UV31 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rnf223Q3UV31 Gm16148-201ENSMUST00000119653 893 ntBASIC25.75■■□□□ 1.71
Rnf223Q3UV31 Zfp131-205ENSMUST00000223812 663 ntBASIC25.75■■□□□ 1.71
Rnf223Q3UV31 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rnf223Q3UV31 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rnf223Q3UV31 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.73■■□□□ 1.71
Rnf223Q3UV31 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf223Q3UV31 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Rnf223Q3UV31 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf223Q3UV31 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Rnf223Q3UV31 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf223Q3UV31 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rnf223Q3UV31 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rnf223Q3UV31 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf223Q3UV31 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf223Q3UV31 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf223Q3UV31 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf223Q3UV31 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.65■■□□□ 1.7
Rnf223Q3UV31 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf223Q3UV31 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf223Q3UV31 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Rnf223Q3UV31 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf223Q3UV31 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf223Q3UV31 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Rnf223Q3UV31 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.57■■□□□ 1.68
Rnf223Q3UV31 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf223Q3UV31 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.55■■□□□ 1.68
Rnf223Q3UV31 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Rnf223Q3UV31 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.52■■□□□ 1.68
Rnf223Q3UV31 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Rnf223Q3UV31 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
Rnf223Q3UV31 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf223Q3UV31 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf223Q3UV31 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf223Q3UV31 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf223Q3UV31 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf223Q3UV31 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf223Q3UV31 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Rnf223Q3UV31 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf223Q3UV31 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.41■■□□□ 1.66
Rnf223Q3UV31 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf223Q3UV31 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf223Q3UV31 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf223Q3UV31 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf223Q3UV31 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.35■■□□□ 1.65
Rnf223Q3UV31 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf223Q3UV31 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf223Q3UV31 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf223Q3UV31 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
Rnf223Q3UV31 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf223Q3UV31 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.32■■□□□ 1.64
Rnf223Q3UV31 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf223Q3UV31 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf223Q3UV31 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Rnf223Q3UV31 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.3■■□□□ 1.64
Rnf223Q3UV31 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf223Q3UV31 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.29■■□□□ 1.64
Rnf223Q3UV31 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf223Q3UV31 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf223Q3UV31 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.27■■□□□ 1.64
Rnf223Q3UV31 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.27■■□□□ 1.64
Rnf223Q3UV31 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf223Q3UV31 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf223Q3UV31 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.25■■□□□ 1.63
Rnf223Q3UV31 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf223Q3UV31 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf223Q3UV31 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf223Q3UV31 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Rnf223Q3UV31 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.17■■□□□ 1.62
Rnf223Q3UV31 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.17■■□□□ 1.62
Rnf223Q3UV31 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf223Q3UV31 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.15■■□□□ 1.62
Rnf223Q3UV31 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf223Q3UV31 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Rnf223Q3UV31 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Rnf223Q3UV31 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Rnf223Q3UV31 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf223Q3UV31 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf223Q3UV31 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rnf223Q3UV31 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rnf223Q3UV31 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rnf223Q3UV31 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.09■■□□□ 1.61
Rnf223Q3UV31 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rnf223Q3UV31 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms