Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.62■■■□□ 2.01
Fam196aQ3USH1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Fam196aQ3USH1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Fam196aQ3USH1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Fam196aQ3USH1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Fam196aQ3USH1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Fam196aQ3USH1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Fam196aQ3USH1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Fam196aQ3USH1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Fam196aQ3USH1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Fam196aQ3USH1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Fam196aQ3USH1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Fam196aQ3USH1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Fam196aQ3USH1 Gm9397-201ENSMUST00000200125 605 ntBASIC27.53■■■□□ 2
Fam196aQ3USH1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Fam196aQ3USH1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.51■■□□□ 1.99
Fam196aQ3USH1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Fam196aQ3USH1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
Fam196aQ3USH1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Fam196aQ3USH1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Fam196aQ3USH1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Fam196aQ3USH1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Fam196aQ3USH1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.43■■□□□ 1.98
Fam196aQ3USH1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Fam196aQ3USH1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Fam196aQ3USH1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.41■■□□□ 1.98
Fam196aQ3USH1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Fam196aQ3USH1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Fam196aQ3USH1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.38■■□□□ 1.97
Fam196aQ3USH1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Fam196aQ3USH1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.35■■□□□ 1.97
Fam196aQ3USH1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Fam196aQ3USH1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Fam196aQ3USH1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.33■■□□□ 1.97
Fam196aQ3USH1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
Fam196aQ3USH1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Fam196aQ3USH1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.28■■□□□ 1.96
Fam196aQ3USH1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Fam196aQ3USH1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Fam196aQ3USH1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.25■■□□□ 1.95
Fam196aQ3USH1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Fam196aQ3USH1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Fam196aQ3USH1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.23■■□□□ 1.95
Fam196aQ3USH1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.23■■□□□ 1.95
Fam196aQ3USH1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Fam196aQ3USH1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.19■■□□□ 1.94
Fam196aQ3USH1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.18■■□□□ 1.94
Fam196aQ3USH1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Fam196aQ3USH1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Fam196aQ3USH1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Fam196aQ3USH1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.14■■□□□ 1.94
Fam196aQ3USH1 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.14■■□□□ 1.93
Fam196aQ3USH1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Fam196aQ3USH1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Fam196aQ3USH1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Fam196aQ3USH1 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.1■■□□□ 1.93
Fam196aQ3USH1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Fam196aQ3USH1 Gm24970-201ENSMUST00000175582 82 ntBASIC27.05■■□□□ 1.92
Fam196aQ3USH1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.04■■□□□ 1.92
Fam196aQ3USH1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Fam196aQ3USH1 Gm8503-201ENSMUST00000118131 455 ntBASIC27.03■■□□□ 1.92
Fam196aQ3USH1 Mipep-204ENSMUST00000225043 1548 ntBASIC27.03■■□□□ 1.92
Fam196aQ3USH1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.01■■□□□ 1.91
Fam196aQ3USH1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27■■□□□ 1.91
Fam196aQ3USH1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Fam196aQ3USH1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Fam196aQ3USH1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Fam196aQ3USH1 Gm6821-201ENSMUST00000107540 542 ntBASIC26.88■■□□□ 1.89
Fam196aQ3USH1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Fam196aQ3USH1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Fam196aQ3USH1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Fam196aQ3USH1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Fam196aQ3USH1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Fam196aQ3USH1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Fam196aQ3USH1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Fam196aQ3USH1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Fam196aQ3USH1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Fam196aQ3USH1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Fam196aQ3USH1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.77■■□□□ 1.88
Fam196aQ3USH1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Fam196aQ3USH1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.74■■□□□ 1.87
Fam196aQ3USH1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Fam196aQ3USH1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.7■■□□□ 1.86
Fam196aQ3USH1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Fam196aQ3USH1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Fam196aQ3USH1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.65■■□□□ 1.86
Fam196aQ3USH1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Fam196aQ3USH1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Fam196aQ3USH1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Fam196aQ3USH1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Fam196aQ3USH1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.58■■□□□ 1.85
Fam196aQ3USH1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Fam196aQ3USH1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Fam196aQ3USH1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.56■■□□□ 1.84
Fam196aQ3USH1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Fam196aQ3USH1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Fam196aQ3USH1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.54■■□□□ 1.84
Fam196aQ3USH1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Fam196aQ3USH1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Fam196aQ3USH1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms