Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.44■■■□□ 2.78
Carmil3Q3UFQ8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Carmil3Q3UFQ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Carmil3Q3UFQ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Carmil3Q3UFQ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.39■■■□□ 2.77
Carmil3Q3UFQ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Carmil3Q3UFQ8 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.34■■■□□ 2.77
Carmil3Q3UFQ8 Mipep-204ENSMUST00000225043 1548 ntBASIC32.34■■■□□ 2.77
Carmil3Q3UFQ8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Carmil3Q3UFQ8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Carmil3Q3UFQ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Carmil3Q3UFQ8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Carmil3Q3UFQ8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.27■■■□□ 2.76
Carmil3Q3UFQ8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Carmil3Q3UFQ8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Carmil3Q3UFQ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
Carmil3Q3UFQ8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Carmil3Q3UFQ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Carmil3Q3UFQ8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Carmil3Q3UFQ8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Carmil3Q3UFQ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Carmil3Q3UFQ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Carmil3Q3UFQ8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Carmil3Q3UFQ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Carmil3Q3UFQ8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.16■■■□□ 2.74
Carmil3Q3UFQ8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.16■■■□□ 2.74
Carmil3Q3UFQ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Carmil3Q3UFQ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.15■■■□□ 2.74
Carmil3Q3UFQ8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Carmil3Q3UFQ8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Carmil3Q3UFQ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.12■■■□□ 2.73
Carmil3Q3UFQ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.12■■■□□ 2.73
Carmil3Q3UFQ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Carmil3Q3UFQ8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Carmil3Q3UFQ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Carmil3Q3UFQ8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Carmil3Q3UFQ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Carmil3Q3UFQ8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Carmil3Q3UFQ8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Carmil3Q3UFQ8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
Carmil3Q3UFQ8 Gm45855-201ENSMUST00000212546 880 ntBASIC31.96■■■□□ 2.71
Carmil3Q3UFQ8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.96■■■□□ 2.71
Carmil3Q3UFQ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Carmil3Q3UFQ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Carmil3Q3UFQ8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Carmil3Q3UFQ8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Carmil3Q3UFQ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Carmil3Q3UFQ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Carmil3Q3UFQ8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Carmil3Q3UFQ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Carmil3Q3UFQ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.85■■■□□ 2.69
Carmil3Q3UFQ8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Carmil3Q3UFQ8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Carmil3Q3UFQ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Carmil3Q3UFQ8 Gm9397-201ENSMUST00000200125 605 ntBASIC31.81■■■□□ 2.68
Carmil3Q3UFQ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Carmil3Q3UFQ8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.79■■■□□ 2.68
Carmil3Q3UFQ8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Carmil3Q3UFQ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Carmil3Q3UFQ8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Carmil3Q3UFQ8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.74■■■□□ 2.67
Carmil3Q3UFQ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Carmil3Q3UFQ8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Carmil3Q3UFQ8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Carmil3Q3UFQ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.71■■■□□ 2.67
Carmil3Q3UFQ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.69■■■□□ 2.66
Carmil3Q3UFQ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Carmil3Q3UFQ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Carmil3Q3UFQ8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Carmil3Q3UFQ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Carmil3Q3UFQ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Carmil3Q3UFQ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.61■■■□□ 2.65
Carmil3Q3UFQ8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Carmil3Q3UFQ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Carmil3Q3UFQ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Carmil3Q3UFQ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.59■■■□□ 2.65
Carmil3Q3UFQ8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.59■■■□□ 2.65
Carmil3Q3UFQ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Carmil3Q3UFQ8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Carmil3Q3UFQ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Carmil3Q3UFQ8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Carmil3Q3UFQ8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Carmil3Q3UFQ8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Carmil3Q3UFQ8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Carmil3Q3UFQ8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
Carmil3Q3UFQ8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Carmil3Q3UFQ8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.51■■■□□ 2.63
Carmil3Q3UFQ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Carmil3Q3UFQ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Carmil3Q3UFQ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Carmil3Q3UFQ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
Carmil3Q3UFQ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Carmil3Q3UFQ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.45■■■□□ 2.63
Carmil3Q3UFQ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
Carmil3Q3UFQ8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.44■■■□□ 2.62
Carmil3Q3UFQ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Carmil3Q3UFQ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Carmil3Q3UFQ8 Gm24970-201ENSMUST00000175582 82 ntBASIC31.41■■■□□ 2.62
Carmil3Q3UFQ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Carmil3Q3UFQ8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms