Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Col5a2Q3U962 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Col5a2Q3U962 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col5a2Q3U962 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Col5a2Q3U962 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Col5a2Q3U962 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Col5a2Q3U962 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
Col5a2Q3U962 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.67■■■□□ 2.82
Col5a2Q3U962 Gm9397-201ENSMUST00000200125 605 ntBASIC32.67■■■□□ 2.82
Col5a2Q3U962 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Col5a2Q3U962 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Col5a2Q3U962 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Col5a2Q3U962 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Col5a2Q3U962 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Col5a2Q3U962 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Col5a2Q3U962 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Col5a2Q3U962 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col5a2Q3U962 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
Col5a2Q3U962 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Col5a2Q3U962 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Col5a2Q3U962 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Col5a2Q3U962 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Col5a2Q3U962 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.47■■■□□ 2.79
Col5a2Q3U962 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Col5a2Q3U962 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.78
Col5a2Q3U962 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Col5a2Q3U962 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.43■■■□□ 2.78
Col5a2Q3U962 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.43■■■□□ 2.78
Col5a2Q3U962 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.42■■■□□ 2.78
Col5a2Q3U962 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.42■■■□□ 2.78
Col5a2Q3U962 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Col5a2Q3U962 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Col5a2Q3U962 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.4■■■□□ 2.78
Col5a2Q3U962 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Col5a2Q3U962 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.38■■■□□ 2.77
Col5a2Q3U962 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
Col5a2Q3U962 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Col5a2Q3U962 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.36■■■□□ 2.77
Col5a2Q3U962 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Col5a2Q3U962 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Col5a2Q3U962 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.32■■■□□ 2.76
Col5a2Q3U962 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Col5a2Q3U962 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Col5a2Q3U962 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Col5a2Q3U962 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Col5a2Q3U962 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Col5a2Q3U962 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Col5a2Q3U962 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.28■■■□□ 2.76
Col5a2Q3U962 Mipep-204ENSMUST00000225043 1548 ntBASIC32.28■■■□□ 2.76
Col5a2Q3U962 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Col5a2Q3U962 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.27■■■□□ 2.76
Col5a2Q3U962 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
Col5a2Q3U962 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Col5a2Q3U962 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Col5a2Q3U962 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
Col5a2Q3U962 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Col5a2Q3U962 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Col5a2Q3U962 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Col5a2Q3U962 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Col5a2Q3U962 Gm24970-201ENSMUST00000175582 82 ntBASIC32.15■■■□□ 2.74
Col5a2Q3U962 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.15■■■□□ 2.74
Col5a2Q3U962 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Col5a2Q3U962 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.13■■■□□ 2.73
Col5a2Q3U962 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Col5a2Q3U962 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.09■■■□□ 2.73
Col5a2Q3U962 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Col5a2Q3U962 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.03■■■□□ 2.72
Col5a2Q3U962 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Col5a2Q3U962 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Col5a2Q3U962 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.01■■■□□ 2.71
Col5a2Q3U962 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.01■■■□□ 2.71
Col5a2Q3U962 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32■■■□□ 2.71
Col5a2Q3U962 Gm8503-201ENSMUST00000118131 455 ntBASIC31.96■■■□□ 2.71
Col5a2Q3U962 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Col5a2Q3U962 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Col5a2Q3U962 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.89■■■□□ 2.7
Col5a2Q3U962 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Col5a2Q3U962 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.85■■■□□ 2.69
Col5a2Q3U962 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Col5a2Q3U962 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Col5a2Q3U962 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Col5a2Q3U962 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Col5a2Q3U962 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.82■■■□□ 2.68
Col5a2Q3U962 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Col5a2Q3U962 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.79■■■□□ 2.68
Col5a2Q3U962 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Col5a2Q3U962 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Col5a2Q3U962 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Col5a2Q3U962 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Col5a2Q3U962 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Col5a2Q3U962 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.71■■■□□ 2.67
Col5a2Q3U962 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Col5a2Q3U962 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Col5a2Q3U962 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Col5a2Q3U962 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Col5a2Q3U962 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Col5a2Q3U962 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.64■■■□□ 2.66
Col5a2Q3U962 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Col5a2Q3U962 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Col5a2Q3U962 Gm6821-201ENSMUST00000107540 542 ntBASIC31.56■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms