Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
GABREP78334 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
GABREP78334 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
GABREP78334 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
GABREP78334 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GABREP78334 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
GABREP78334 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
GABREP78334 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.9■■□□□ 1.9
GABREP78334 AL133380.1-201ENST00000506013 324 ntBASIC26.89■■□□□ 1.9
GABREP78334 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
GABREP78334 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
GABREP78334 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.86■■□□□ 1.89
GABREP78334 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.86■■□□□ 1.89
GABREP78334 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
GABREP78334 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
GABREP78334 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
GABREP78334 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
GABREP78334 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
GABREP78334 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.8■■□□□ 1.88
GABREP78334 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
GABREP78334 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.78■■□□□ 1.88
GABREP78334 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.77■■□□□ 1.88
GABREP78334 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
GABREP78334 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
GABREP78334 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
GABREP78334 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
GABREP78334 MIR3665-201ENST00000578708 105 ntBASIC26.74■■□□□ 1.87
GABREP78334 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.73■■□□□ 1.87
GABREP78334 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.73■■□□□ 1.87
GABREP78334 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.73■■□□□ 1.87
GABREP78334 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.72■■□□□ 1.87
GABREP78334 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
GABREP78334 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
GABREP78334 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
GABREP78334 MIR7108-201ENST00000614319 87 ntBASIC26.7■■□□□ 1.86
GABREP78334 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.68■■□□□ 1.86
GABREP78334 ABHD17AP4-201ENST00000411545 909 ntBASIC26.68■■□□□ 1.86
GABREP78334 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
GABREP78334 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
GABREP78334 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
GABREP78334 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
GABREP78334 AC087741.3-201ENST00000624270 1347 ntBASIC26.61■■□□□ 1.85
GABREP78334 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
GABREP78334 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.6■■□□□ 1.85
GABREP78334 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.6■■□□□ 1.85
GABREP78334 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
GABREP78334 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.58■■□□□ 1.85
GABREP78334 DUX4L28-201ENST00000623687 678 ntBASIC26.58■■□□□ 1.85
GABREP78334 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
GABREP78334 AC044849.2-201ENST00000606596 710 ntBASIC26.54■■□□□ 1.84
GABREP78334 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.54■■□□□ 1.84
GABREP78334 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
GABREP78334 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.52■■□□□ 1.84
GABREP78334 MIR762-201ENST00000390236 83 ntBASIC26.52■■□□□ 1.84
GABREP78334 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
GABREP78334 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.51■■□□□ 1.83
GABREP78334 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
GABREP78334 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GABREP78334 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
GABREP78334 AC005559.1-201ENST00000589661 871 ntBASIC26.49■■□□□ 1.83
GABREP78334 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.49■■□□□ 1.83
GABREP78334 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
GABREP78334 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
GABREP78334 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
GABREP78334 HLA-V-202ENST00000446817 847 ntBASIC26.45■■□□□ 1.82
GABREP78334 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.45■■□□□ 1.82
GABREP78334 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.44■■□□□ 1.82
GABREP78334 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.43■■□□□ 1.82
GABREP78334 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
GABREP78334 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.42■■□□□ 1.82
GABREP78334 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.42■■□□□ 1.82
GABREP78334 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.42■■□□□ 1.82
GABREP78334 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.4■■□□□ 1.82
GABREP78334 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.4■■□□□ 1.82
GABREP78334 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
GABREP78334 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.39■■□□□ 1.82
GABREP78334 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
GABREP78334 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
GABREP78334 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
GABREP78334 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GABREP78334 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
GABREP78334 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
GABREP78334 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.36■■□□□ 1.81
GABREP78334 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
GABREP78334 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.33■■□□□ 1.81
GABREP78334 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.33■■□□□ 1.81
GABREP78334 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
GABREP78334 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
GABREP78334 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.31■■□□□ 1.8
GABREP78334 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GABREP78334 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
GABREP78334 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.3■■□□□ 1.8
GABREP78334 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.29■■□□□ 1.8
GABREP78334 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.29■■□□□ 1.8
GABREP78334 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
GABREP78334 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
GABREP78334 ZNRF2P2-203ENST00000454624 420 ntBASIC26.27■■□□□ 1.8
GABREP78334 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms