Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmga2P52927 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
Hmga2P52927 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.27■■□□□ 1.16
Hmga2P52927 Zxda-201ENSMUST00000117281 2621 ntBASIC22.25■■□□□ 1.15
Hmga2P52927 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Hmga2P52927 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmga2P52927 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Hmga2P52927 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmga2P52927 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmga2P52927 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmga2P52927 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmga2P52927 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmga2P52927 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hmga2P52927 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hmga2P52927 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.19■■□□□ 1.14
Hmga2P52927 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmga2P52927 Rab21-202ENSMUST00000218831 843 ntBASIC22.18■■□□□ 1.14
Hmga2P52927 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmga2P52927 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmga2P52927 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Hmga2P52927 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmga2P52927 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.16■■□□□ 1.14
Hmga2P52927 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmga2P52927 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmga2P52927 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Hmga2P52927 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Hmga2P52927 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Hmga2P52927 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Hmga2P52927 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmga2P52927 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.11■■□□□ 1.13
Hmga2P52927 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Hmga2P52927 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Hmga2P52927 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmga2P52927 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hmga2P52927 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Hmga2P52927 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hmga2P52927 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Hmga2P52927 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmga2P52927 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmga2P52927 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmga2P52927 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Hmga2P52927 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmga2P52927 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmga2P52927 Mipep-204ENSMUST00000225043 1548 ntBASIC22.04■■□□□ 1.12
Hmga2P52927 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmga2P52927 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Hmga2P52927 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Hmga2P52927 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hmga2P52927 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
Hmga2P52927 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hmga2P52927 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Hmga2P52927 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmga2P52927 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.99■■□□□ 1.11
Hmga2P52927 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hmga2P52927 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmga2P52927 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hmga2P52927 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hmga2P52927 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.97■■□□□ 1.11
Hmga2P52927 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Hmga2P52927 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmga2P52927 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hmga2P52927 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
Hmga2P52927 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hmga2P52927 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.91■■□□□ 1.1
Hmga2P52927 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmga2P52927 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hmga2P52927 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hmga2P52927 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmga2P52927 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmga2P52927 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.85■■□□□ 1.09
Hmga2P52927 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Hmga2P52927 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hmga2P52927 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmga2P52927 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Hmga2P52927 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmga2P52927 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmga2P52927 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmga2P52927 Amer2-203ENSMUST00000225247 2662 ntBASIC21.79■■□□□ 1.08
Hmga2P52927 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Hmga2P52927 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hmga2P52927 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Hmga2P52927 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.75■■□□□ 1.07
Hmga2P52927 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hmga2P52927 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmga2P52927 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Hmga2P52927 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmga2P52927 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmga2P52927 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmga2P52927 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmga2P52927 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmga2P52927 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Hmga2P52927 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Hmga2P52927 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmga2P52927 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmga2P52927 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hmga2P52927 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmga2P52927 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.66■■□□□ 1.06
Hmga2P52927 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Hmga2P52927 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmga2P52927 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms