Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.466e-12■■■■■ 41.5
NCBP2P52298 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.03□□□□□ -0.326e-12■■■■■ 41.5
NCBP2P52298 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.79□□□□□ -0.366e-12■■■■■ 41.5
NCBP2P52298 RABEPK-205ENST00000416065 733 ntTSL 311.8□□□□□ -0.526e-12■■■■■ 41.5
NCBP2P52298 RABEPK-203ENST00000373544 2450 ntTSL 1 (best) BASIC11.46□□□□□ -0.576e-12■■■■■ 41.5
NCBP2P52298 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.238e-12■■■■■ 41.2
NCBP2P52298 XPO7-206ENST00000519769 590 ntTSL 32.64□□□□□ -1.998e-12■■■■■ 41.2
NCBP2P52298 XPO7-208ENST00000521303 569 ntTSL 52.14□□□□□ -2.078e-12■■■■■ 41.2
NCBP2P52298 KIAA0907-210ENST00000491599 773 ntTSL 315.21■□□□□ 0.031e-20■■■■■ 41
NCBP2P52298 KIAA0907-206ENST00000466713 911 ntTSL 1 (best)14.22□□□□□ -0.131e-20■■■■■ 41
NCBP2P52298 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.07□□□□□ -0.161e-20■■■■■ 41
NCBP2P52298 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.71e-20■■■■■ 41
NCBP2P52298 KIAA0907-202ENST00000368320 4499 ntTSL 1 (best) BASIC10.68□□□□□ -0.71e-20■■■■■ 41
NCBP2P52298 KIAA0907-208ENST00000482337 1135 ntTSL 1 (best)8.63□□□□□ -1.031e-20■■■■■ 41
NCBP2P52298 CHKB-210ENST00000484266 1401 ntTSL 230.51■■■□□ 2.472e-12■■■■■ 41
NCBP2P52298 CHKB-207ENST00000476289 1010 ntTSL 529.41■■■□□ 2.32e-12■■■■■ 41
NCBP2P52298 CHKB-212ENST00000492582 2069 ntTSL 227.29■■□□□ 1.962e-12■■■■■ 41
NCBP2P52298 CHKB-208ENST00000479003 2114 ntTSL 225.87■■□□□ 1.732e-12■■■■■ 41
NCBP2P52298 CHKB-CPT1B-203ENST00000492556 4906 ntTSL 220.32■□□□□ 0.842e-12■■■■■ 41
NCBP2P52298 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.672e-12■■■■■ 41
NCBP2P52298 CHKB-209ENST00000481673 1856 ntTSL 1 (best)18.8■□□□□ 0.62e-12■■■■■ 41
NCBP2P52298 CHKB-202ENST00000463053 886 ntTSL 315.19■□□□□ 0.022e-12■■■■■ 41
NCBP2P52298 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.58□□□□□ -0.245e-8■■■■■ 41
NCBP2P52298 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC11.23□□□□□ -0.615e-8■■■■■ 41
NCBP2P52298 SIRT5-202ENST00000379250 3727 ntTSL 1 (best)8.79□□□□□ -15e-8■■■■■ 41
NCBP2P52298 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.57□□□□□ -1.045e-8■■■■■ 41
NCBP2P52298 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.115e-8■■■■■ 41
NCBP2P52298 SIRT5-206ENST00000606427 571 ntTSL 42.67□□□□□ -1.985e-8■■■■■ 41
NCBP2P52298 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.234e-9■■■■■ 40.6
NCBP2P52298 NRBP2-209ENST00000533093 3877 ntTSL 1 (best)16.22■□□□□ 0.194e-9■■■■■ 40.6
NCBP2P52298 C1RL-207ENST00000539927 354 ntTSL 217.49■□□□□ 0.398e-11■■■■■ 40.5
NCBP2P52298 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.048e-11■■■■■ 40.5
NCBP2P52298 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.83□□□□□ -0.28e-11■■■■■ 40.5
NCBP2P52298 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.468e-11■■■■■ 40.5
NCBP2P52298 C1RL-208ENST00000543933 592 ntTSL 510.27□□□□□ -0.778e-11■■■■■ 40.5
NCBP2P52298 C1RL-211ENST00000545280 449 ntTSL 3 BASIC9.12□□□□□ -0.958e-11■■■■■ 40.5
NCBP2P52298 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)20.39■□□□□ 0.853e-10■■■■■ 40.4
NCBP2P52298 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.353e-10■■■■■ 40.4
NCBP2P52298 ZNF331-219ENST00000513929 1424 ntTSL 217.21■□□□□ 0.345e-9■■■■■ 40.2
NCBP2P52298 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.485e-9■■■■■ 40.2
NCBP2P52298 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.19■□□□□ 0.025e-11■■■■■ 40.1
NCBP2P52298 ARHGAP5-204ENST00000432921 5003 ntTSL 5 BASIC9.25□□□□□ -0.935e-11■■■■■ 40.1
NCBP2P52298 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.055e-11■■■■■ 40.1
NCBP2P52298 RPL22L1-201ENST00000295830 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.782e-10■■■■■ 39.7
NCBP2P52298 RPL22L1-206ENST00000494771 587 ntTSL 38.05□□□□□ -1.122e-10■■■■■ 39.7
NCBP2P52298 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.252e-10■■■■■ 39.7
NCBP2P52298 RPL22L1-204ENST00000475836 581 ntTSL 1 (best)6.01□□□□□ -1.452e-10■■■■■ 39.7
NCBP2P52298 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.225e-10■■■■■ 39.7
NCBP2P52298 TMEM2-212ENST00000545719 533 ntTSL 43.71□□□□□ -1.825e-10■■■■■ 39.7
NCBP2P52298 NR2F2-AS1-202ENST00000557863 515 ntTSL 314.82□□□□□ -0.042e-35■■■■■ 39.3
NCBP2P52298 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC10.86□□□□□ -0.672e-35■■■■■ 39.3
NCBP2P52298 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC9.46□□□□□ -0.892e-35■■■■■ 39.3
NCBP2P52298 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC8.77□□□□□ -1.012e-35■■■■■ 39.3
NCBP2P52298 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.75□□□□□ -1.332e-35■■■■■ 39.3
NCBP2P52298 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.6□□□□□ -1.992e-35■■■■■ 39.3
NCBP2P52298 CYTOR-205ENST00000413202 422 ntTSL 1 (best)12.53□□□□□ -0.42e-10■■■■■ 39.1
NCBP2P52298 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC10.92□□□□□ -0.662e-10■■■■■ 39.1
NCBP2P52298 CYTOR-201ENST00000331944 529 ntTSL 1 (best)10.66□□□□□ -0.72e-10■■■■■ 39.1
NCBP2P52298 CYTOR-210ENST00000437561 455 ntTSL 210.11□□□□□ -0.792e-10■■■■■ 39.1
NCBP2P52298 CYTOR-211ENST00000455131 733 ntTSL 5 BASIC10.11□□□□□ -0.792e-10■■■■■ 39.1
NCBP2P52298 CYTOR-209ENST00000423846 457 ntTSL 1 (best)10.11□□□□□ -0.792e-10■■■■■ 39.1
NCBP2P52298 CYTOR-208ENST00000419680 675 ntTSL 5 BASIC10.11□□□□□ -0.792e-10■■■■■ 39.1
NCBP2P52298 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.41□□□□□ -1.382e-10■■■■■ 39.1
NCBP2P52298 CYTOR-214ENST00000629257 323 ntTSL 55.87□□□□□ -1.472e-10■■■■■ 39.1
NCBP2P52298 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.26□□□□□ -1.572e-10■■■■■ 39.1
NCBP2P52298 CYTOR-203ENST00000409139 519 ntTSL 33.33□□□□□ -1.882e-10■■■■■ 39.1
NCBP2P52298 ITGB1-215ENST00000488494 540 ntTSL 416.26■□□□□ 0.192e-8■■■■■ 39
NCBP2P52298 ITGB1-210ENST00000474568 788 ntTSL 514.73□□□□□ -0.052e-8■■■■■ 39
NCBP2P52298 ITGB1-204ENST00000417122 569 ntTSL 414.31□□□□□ -0.122e-8■■■■■ 39
NCBP2P52298 ITGB1-211ENST00000475184 552 ntTSL 414.11□□□□□ -0.152e-8■■■■■ 39
NCBP2P52298 ITGB1-218ENST00000528877 546 ntTSL 46.42□□□□□ -1.382e-8■■■■■ 39
NCBP2P52298 ITGB1-203ENST00000414670 500 ntTSL 35.84□□□□□ -1.472e-8■■■■■ 39
NCBP2P52298 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.52e-8■■■■■ 39
NCBP2P52298 ITGB1-219ENST00000534049 562 ntTSL 43.15□□□□□ -1.912e-8■■■■■ 39
NCBP2P52298 ITGB1-213ENST00000484088 580 ntTSL 41.41□□□□□ -2.182e-8■■■■■ 39
NCBP2P52298 METTL12-202ENST00000529868 2870 ntTSL 1 (best)14.4□□□□□ -0.16e-17■■■■■ 38.8
NCBP2P52298 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.356e-17■■■■■ 38.8
NCBP2P52298 METTL12-201ENST00000398922 1368 ntTSL 412.37□□□□□ -0.436e-17■■■■■ 38.8
NCBP2P52298 MORF4L2-212ENST00000474653 573 ntTSL 22.73□□□□□ -1.972e-8■■■■■ 38.6
NCBP2P52298 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.06■□□□□ 0.86e-17■■■■■ 38.5
NCBP2P52298 CCNL1-226ENST00000631619 2457 ntTSL 516.79■□□□□ 0.286e-17■■■■■ 38.5
NCBP2P52298 CCNL1-207ENST00000465947 793 ntTSL 516.51■□□□□ 0.236e-17■■■■■ 38.5
NCBP2P52298 CCNL1-208ENST00000466101 911 ntTSL 215.62■□□□□ 0.096e-17■■■■■ 38.5
NCBP2P52298 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.2■□□□□ 0.026e-17■■■■■ 38.5
NCBP2P52298 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.16e-17■■■■■ 38.5
NCBP2P52298 CCNL1-222ENST00000479596 883 ntTSL 313.7□□□□□ -0.226e-17■■■■■ 38.5
NCBP2P52298 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)13.35□□□□□ -0.276e-17■■■■■ 38.5
NCBP2P52298 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)13.13□□□□□ -0.316e-17■■■■■ 38.5
NCBP2P52298 CCNL1-219ENST00000477127 1464 ntTSL 512.74□□□□□ -0.376e-17■■■■■ 38.5
NCBP2P52298 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)12.08□□□□□ -0.476e-17■■■■■ 38.5
NCBP2P52298 CCNL1-213ENST00000471044 753 ntTSL 211.37□□□□□ -0.596e-17■■■■■ 38.5
NCBP2P52298 MED16-209ENST00000592943 1628 ntTSL 1 (best)16.88■□□□□ 0.291e-7■■■■■ 38.5
NCBP2P52298 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.27■□□□□ 0.21e-7■■■■■ 38.5
NCBP2P52298 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.27■□□□□ 0.21e-7■■■■■ 38.5
NCBP2P52298 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.54■□□□□ 0.081e-7■■■■■ 38.5
NCBP2P52298 MED16-212ENST00000607471 2004 ntTSL 1 (best)14.92□□□□□ -0.021e-7■■■■■ 38.5
NCBP2P52298 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.081e-7■■■■■ 38.5
NCBP2P52298 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.111e-7■■■■■ 38.5
NCBP2P52298 MED16-205ENST00000586017 1403 ntTSL 1 (best)13.73□□□□□ -0.211e-7■■■■■ 38.5
NCBP2P52298 MED16-210ENST00000606248 3181 ntTSL 1 (best)13.16□□□□□ -0.31e-7■■■■■ 38.5
Retrieved 100 of 18,329 protein–RNA pairs in 348.2 ms