Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL391121.1-201ENST00000607967 1349 ntBASIC31.49■■■□□ 2.63
CPT1AP50416 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.48■■■□□ 2.63
CPT1AP50416 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CPT1AP50416 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.44■■■□□ 2.62
CPT1AP50416 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.44■■■□□ 2.62
CPT1AP50416 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CPT1AP50416 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CPT1AP50416 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CPT1AP50416 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CPT1AP50416 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CPT1AP50416 AP006261.1-201ENST00000584783 668 ntBASIC31.38■■■□□ 2.61
CPT1AP50416 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CPT1AP50416 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
CPT1AP50416 AL162393.1-201ENST00000437852 946 ntBASIC31.35■■■□□ 2.61
CPT1AP50416 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPT1AP50416 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CPT1AP50416 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.33■■■□□ 2.61
CPT1AP50416 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CPT1AP50416 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.32■■■□□ 2.6
CPT1AP50416 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CPT1AP50416 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.29■■■□□ 2.6
CPT1AP50416 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPT1AP50416 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.28■■■□□ 2.6
CPT1AP50416 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CPT1AP50416 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.28■■■□□ 2.6
CPT1AP50416 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.27■■■□□ 2.6
CPT1AP50416 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CPT1AP50416 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CPT1AP50416 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CPT1AP50416 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CPT1AP50416 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CPT1AP50416 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CPT1AP50416 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CPT1AP50416 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CPT1AP50416 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CPT1AP50416 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.21■■■□□ 2.59
CPT1AP50416 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CPT1AP50416 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CPT1AP50416 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CPT1AP50416 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CPT1AP50416 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.18■■■□□ 2.58
CPT1AP50416 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.18■■■□□ 2.58
CPT1AP50416 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CPT1AP50416 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CPT1AP50416 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CPT1AP50416 MIR3665-201ENST00000578708 105 ntBASIC31.13■■■□□ 2.57
CPT1AP50416 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.12■■■□□ 2.57
CPT1AP50416 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CPT1AP50416 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CPT1AP50416 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CPT1AP50416 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CPT1AP50416 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.08■■■□□ 2.57
CPT1AP50416 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.08■■■□□ 2.57
CPT1AP50416 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.07■■■□□ 2.56
CPT1AP50416 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CPT1AP50416 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CPT1AP50416 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CPT1AP50416 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CPT1AP50416 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
CPT1AP50416 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.03■■■□□ 2.56
CPT1AP50416 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.03■■■□□ 2.56
CPT1AP50416 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.03■■■□□ 2.56
CPT1AP50416 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CPT1AP50416 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CPT1AP50416 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.01■■■□□ 2.55
CPT1AP50416 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.01■■■□□ 2.55
CPT1AP50416 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.01■■■□□ 2.55
CPT1AP50416 MIR762-201ENST00000390236 83 ntBASIC30.97■■■□□ 2.55
CPT1AP50416 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CPT1AP50416 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CPT1AP50416 DUX4L28-201ENST00000623687 678 ntBASIC30.96■■■□□ 2.55
CPT1AP50416 AC087741.3-201ENST00000624270 1347 ntBASIC30.95■■■□□ 2.54
CPT1AP50416 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
CPT1AP50416 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.92■■■□□ 2.54
CPT1AP50416 AC005559.1-201ENST00000589661 871 ntBASIC30.91■■■□□ 2.54
CPT1AP50416 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.89■■■□□ 2.54
CPT1AP50416 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
CPT1AP50416 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CPT1AP50416 AC044849.2-201ENST00000606596 710 ntBASIC30.86■■■□□ 2.53
CPT1AP50416 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.85■■■□□ 2.53
CPT1AP50416 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.85■■■□□ 2.53
CPT1AP50416 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
CPT1AP50416 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.82■■■□□ 2.52
CPT1AP50416 ABHD17AP4-201ENST00000411545 909 ntBASIC30.81■■■□□ 2.52
CPT1AP50416 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CPT1AP50416 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CPT1AP50416 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.8■■■□□ 2.52
CPT1AP50416 WASH5P-204ENST00000632292 975 ntBASIC30.8■■■□□ 2.52
CPT1AP50416 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.79■■■□□ 2.52
CPT1AP50416 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.79■■■□□ 2.52
CPT1AP50416 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
CPT1AP50416 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CPT1AP50416 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
CPT1AP50416 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CPT1AP50416 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CPT1AP50416 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
CPT1AP50416 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CPT1AP50416 MIR7108-201ENST00000614319 87 ntBASIC30.73■■■□□ 2.51
CPT1AP50416 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CPT1AP50416 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms