Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdkn1aP39689 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdkn1aP39689 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cdkn1aP39689 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdkn1aP39689 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Cdkn1aP39689 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.79■■□□□ 1.08
Cdkn1aP39689 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdkn1aP39689 Gm16148-201ENSMUST00000119653 893 ntBASIC21.78■■□□□ 1.08
Cdkn1aP39689 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Cdkn1aP39689 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdkn1aP39689 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.76■■□□□ 1.07
Cdkn1aP39689 Zfp131-205ENSMUST00000223812 663 ntBASIC21.76■■□□□ 1.07
Cdkn1aP39689 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkn1aP39689 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cdkn1aP39689 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdkn1aP39689 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdkn1aP39689 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdkn1aP39689 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkn1aP39689 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdkn1aP39689 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdkn1aP39689 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkn1aP39689 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkn1aP39689 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkn1aP39689 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkn1aP39689 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.64■■□□□ 1.05
Cdkn1aP39689 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkn1aP39689 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cdkn1aP39689 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkn1aP39689 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkn1aP39689 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.59■■□□□ 1.05
Cdkn1aP39689 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdkn1aP39689 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cdkn1aP39689 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdkn1aP39689 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdkn1aP39689 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cdkn1aP39689 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Cdkn1aP39689 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdkn1aP39689 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Cdkn1aP39689 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cdkn1aP39689 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.54■■□□□ 1.04
Cdkn1aP39689 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkn1aP39689 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdkn1aP39689 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkn1aP39689 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkn1aP39689 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdkn1aP39689 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdkn1aP39689 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkn1aP39689 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdkn1aP39689 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.47■■□□□ 1.03
Cdkn1aP39689 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdkn1aP39689 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Cdkn1aP39689 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
Cdkn1aP39689 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkn1aP39689 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdkn1aP39689 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdkn1aP39689 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdkn1aP39689 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Cdkn1aP39689 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.39■■□□□ 1.01
Cdkn1aP39689 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdkn1aP39689 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdkn1aP39689 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdkn1aP39689 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn1aP39689 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdkn1aP39689 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.36■■□□□ 1.01
Cdkn1aP39689 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdkn1aP39689 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdkn1aP39689 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdkn1aP39689 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdkn1aP39689 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkn1aP39689 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdkn1aP39689 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.31■■□□□ 1
Cdkn1aP39689 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdkn1aP39689 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdkn1aP39689 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cdkn1aP39689 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn1aP39689 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdkn1aP39689 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.27■■□□□ 1
Cdkn1aP39689 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Cdkn1aP39689 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.26■□□□□ 0.99
Cdkn1aP39689 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkn1aP39689 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdkn1aP39689 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkn1aP39689 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdkn1aP39689 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdkn1aP39689 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkn1aP39689 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdkn1aP39689 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdkn1aP39689 Gm45855-201ENSMUST00000212546 880 ntBASIC21.2■□□□□ 0.98
Cdkn1aP39689 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdkn1aP39689 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkn1aP39689 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Cdkn1aP39689 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdkn1aP39689 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.17■□□□□ 0.98
Cdkn1aP39689 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdkn1aP39689 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cdkn1aP39689 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdkn1aP39689 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkn1aP39689 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkn1aP39689 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdkn1aP39689 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms