Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab3dP35276 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab3dP35276 Gm25238-201ENSMUST00000174914 89 ntBASIC21.57■■□□□ 1.04
Rab3dP35276 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rab3dP35276 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Rab3dP35276 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3dP35276 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3dP35276 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.48■■□□□ 1.03
Rab3dP35276 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3dP35276 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3dP35276 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rab3dP35276 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Rab3dP35276 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab3dP35276 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab3dP35276 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rab3dP35276 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab3dP35276 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab3dP35276 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rab3dP35276 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rab3dP35276 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab3dP35276 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rab3dP35276 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rab3dP35276 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rab3dP35276 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rab3dP35276 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.41■■□□□ 1.02
Rab3dP35276 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3dP35276 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3dP35276 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rab3dP35276 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rab3dP35276 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3dP35276 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3dP35276 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.37■■□□□ 1.01
Rab3dP35276 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3dP35276 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.36■■□□□ 1.01
Rab3dP35276 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3dP35276 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.36■■□□□ 1.01
Rab3dP35276 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rab3dP35276 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3dP35276 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Rab3dP35276 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Rab3dP35276 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rab3dP35276 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab3dP35276 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rab3dP35276 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rab3dP35276 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.32■■□□□ 1
Rab3dP35276 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rab3dP35276 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rab3dP35276 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rab3dP35276 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rab3dP35276 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rab3dP35276 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rab3dP35276 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Rab3dP35276 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rab3dP35276 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Rab3dP35276 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rab3dP35276 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rab3dP35276 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rab3dP35276 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Rab3dP35276 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3dP35276 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rab3dP35276 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3dP35276 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rab3dP35276 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab3dP35276 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab3dP35276 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab3dP35276 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.22■□□□□ 0.99
Rab3dP35276 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab3dP35276 Rab21-202ENSMUST00000218831 843 ntBASIC21.22■□□□□ 0.99
Rab3dP35276 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab3dP35276 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rab3dP35276 Mipep-204ENSMUST00000225043 1548 ntBASIC21.2■□□□□ 0.98
Rab3dP35276 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab3dP35276 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab3dP35276 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rab3dP35276 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3dP35276 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3dP35276 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab3dP35276 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab3dP35276 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rab3dP35276 Amer2-203ENSMUST00000225247 2662 ntBASIC21.13■□□□□ 0.97
Rab3dP35276 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.12■□□□□ 0.97
Rab3dP35276 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rab3dP35276 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rab3dP35276 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Rab3dP35276 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rab3dP35276 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab3dP35276 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rab3dP35276 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rab3dP35276 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab3dP35276 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab3dP35276 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rab3dP35276 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.05■□□□□ 0.96
Rab3dP35276 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Rab3dP35276 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rab3dP35276 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rab3dP35276 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.01■□□□□ 0.95
Rab3dP35276 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rab3dP35276 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Rab3dP35276 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rab3dP35276 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms