Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TPM3P06753 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TPM3P06753 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TPM3P06753 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TPM3P06753 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TPM3P06753 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TPM3P06753 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.04■■■□□ 2.56
TPM3P06753 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
TPM3P06753 AC015813.7-201ENST00000623294 581 ntBASIC31.03■■■□□ 2.56
TPM3P06753 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
TPM3P06753 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
TPM3P06753 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TPM3P06753 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TPM3P06753 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31■■■□□ 2.55
TPM3P06753 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TPM3P06753 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TPM3P06753 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TPM3P06753 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TPM3P06753 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TPM3P06753 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TPM3P06753 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
TPM3P06753 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TPM3P06753 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TPM3P06753 AL161658.1-201ENST00000623641 1967 ntBASIC30.94■■■□□ 2.54
TPM3P06753 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.93■■■□□ 2.54
TPM3P06753 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.93■■■□□ 2.54
TPM3P06753 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.9■■■□□ 2.54
TPM3P06753 ABCB10P1-201ENST00000614297 2181 ntBASIC30.9■■■□□ 2.54
TPM3P06753 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TPM3P06753 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
TPM3P06753 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TPM3P06753 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TPM3P06753 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TPM3P06753 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TPM3P06753 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TPM3P06753 ABCB10P3-201ENST00000561950 2166 ntBASIC30.85■■■□□ 2.53
TPM3P06753 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TPM3P06753 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
TPM3P06753 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TPM3P06753 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.52
TPM3P06753 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TPM3P06753 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TPM3P06753 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
TPM3P06753 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TPM3P06753 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TPM3P06753 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.8■■■□□ 2.52
TPM3P06753 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TPM3P06753 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TPM3P06753 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
TPM3P06753 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
TPM3P06753 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TPM3P06753 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
TPM3P06753 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.76■■■□□ 2.51
TPM3P06753 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TPM3P06753 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TPM3P06753 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
TPM3P06753 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TPM3P06753 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.71■■■□□ 2.51
TPM3P06753 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TPM3P06753 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TPM3P06753 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
TPM3P06753 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TPM3P06753 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TPM3P06753 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TPM3P06753 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TPM3P06753 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TPM3P06753 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.64■■■□□ 2.49
TPM3P06753 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TPM3P06753 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
TPM3P06753 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
TPM3P06753 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.62■■■□□ 2.49
TPM3P06753 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.61■■■□□ 2.49
TPM3P06753 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
TPM3P06753 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
TPM3P06753 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TPM3P06753 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.57■■■□□ 2.48
TPM3P06753 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TPM3P06753 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.56■■■□□ 2.48
TPM3P06753 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TPM3P06753 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.54■■■□□ 2.48
TPM3P06753 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.53■■■□□ 2.48
TPM3P06753 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
TPM3P06753 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.53■■■□□ 2.48
TPM3P06753 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
TPM3P06753 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.52■■■□□ 2.48
TPM3P06753 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.52■■■□□ 2.48
TPM3P06753 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TPM3P06753 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TPM3P06753 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
TPM3P06753 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
TPM3P06753 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TPM3P06753 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TPM3P06753 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
TPM3P06753 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
TPM3P06753 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.44■■■□□ 2.46
TPM3P06753 AC120057.4-201ENST00000624722 1615 ntBASIC30.44■■■□□ 2.46
TPM3P06753 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TPM3P06753 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
TPM3P06753 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
TPM3P06753 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms