Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
HMGCRP04035 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
HMGCRP04035 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.22■■■□□ 2.75
HMGCRP04035 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
HMGCRP04035 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
HMGCRP04035 AL133380.1-201ENST00000506013 324 ntBASIC32.19■■■□□ 2.74
HMGCRP04035 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
HMGCRP04035 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
HMGCRP04035 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
HMGCRP04035 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.12■■■□□ 2.73
HMGCRP04035 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
HMGCRP04035 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
HMGCRP04035 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
HMGCRP04035 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
HMGCRP04035 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
HMGCRP04035 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
HMGCRP04035 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.08■■■□□ 2.73
HMGCRP04035 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.08■■■□□ 2.73
HMGCRP04035 MIR7108-201ENST00000614319 87 ntBASIC32.08■■■□□ 2.73
HMGCRP04035 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.07■■■□□ 2.72
HMGCRP04035 MIR3665-201ENST00000578708 105 ntBASIC32.07■■■□□ 2.72
HMGCRP04035 ABHD17AP4-201ENST00000411545 909 ntBASIC32.06■■■□□ 2.72
HMGCRP04035 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
HMGCRP04035 EBPL-202ENST00000378268 680 ntTSL 3 BASIC32.04■■■□□ 2.72
HMGCRP04035 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.03■■■□□ 2.72
HMGCRP04035 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
HMGCRP04035 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
HMGCRP04035 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.95■■■□□ 2.71
HMGCRP04035 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.95■■■□□ 2.7
HMGCRP04035 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
HMGCRP04035 AC087741.3-201ENST00000624270 1347 ntBASIC31.93■■■□□ 2.7
HMGCRP04035 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
HMGCRP04035 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HMGCRP04035 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.91■■■□□ 2.7
HMGCRP04035 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGCRP04035 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HMGCRP04035 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.9■■■□□ 2.7
HMGCRP04035 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HMGCRP04035 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
HMGCRP04035 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.89■■■□□ 2.7
HMGCRP04035 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
HMGCRP04035 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.87■■■□□ 2.69
HMGCRP04035 DUX4L28-201ENST00000623687 678 ntBASIC31.87■■■□□ 2.69
HMGCRP04035 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.86■■■□□ 2.69
HMGCRP04035 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.82■■■□□ 2.68
HMGCRP04035 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
HMGCRP04035 AC044849.2-201ENST00000606596 710 ntBASIC31.82■■■□□ 2.68
HMGCRP04035 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.81■■■□□ 2.68
HMGCRP04035 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HMGCRP04035 HLA-V-202ENST00000446817 847 ntBASIC31.78■■■□□ 2.68
HMGCRP04035 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
HMGCRP04035 MIR762-201ENST00000390236 83 ntBASIC31.76■■■□□ 2.67
HMGCRP04035 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.76■■■□□ 2.67
HMGCRP04035 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
HMGCRP04035 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
HMGCRP04035 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.72■■■□□ 2.67
HMGCRP04035 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.72■■■□□ 2.67
HMGCRP04035 AC005559.1-201ENST00000589661 871 ntBASIC31.72■■■□□ 2.67
HMGCRP04035 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGCRP04035 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
HMGCRP04035 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.7■■■□□ 2.67
HMGCRP04035 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.68■■■□□ 2.66
HMGCRP04035 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
HMGCRP04035 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
HMGCRP04035 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.64■■■□□ 2.66
HMGCRP04035 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.63■■■□□ 2.65
HMGCRP04035 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
HMGCRP04035 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
HMGCRP04035 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
HMGCRP04035 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.59■■■□□ 2.65
HMGCRP04035 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.59■■■□□ 2.65
HMGCRP04035 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
HMGCRP04035 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HMGCRP04035 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.56■■■□□ 2.64
HMGCRP04035 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.56■■■□□ 2.64
HMGCRP04035 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.56■■■□□ 2.64
HMGCRP04035 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.54■■■□□ 2.64
HMGCRP04035 ZNRF2P2-203ENST00000454624 420 ntBASIC31.52■■■□□ 2.64
HMGCRP04035 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
HMGCRP04035 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.51■■■□□ 2.63
HMGCRP04035 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
HMGCRP04035 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGCRP04035 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.49■■■□□ 2.63
HMGCRP04035 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.49■■■□□ 2.63
HMGCRP04035 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
HMGCRP04035 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
HMGCRP04035 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.47■■■□□ 2.63
HMGCRP04035 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGCRP04035 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
HMGCRP04035 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.45■■■□□ 2.63
HMGCRP04035 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HMGCRP04035 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HMGCRP04035 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.45■■■□□ 2.63
HMGCRP04035 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
HMGCRP04035 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGCRP04035 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HMGCRP04035 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HMGCRP04035 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
HMGCRP04035 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.36■■■□□ 2.61
HMGCRP04035 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms