Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
MT-CO3P00414 AL133380.1-201ENST00000506013 324 ntBASIC27.09■■□□□ 1.93
MT-CO3P00414 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
MT-CO3P00414 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
MT-CO3P00414 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.03■■□□□ 1.92
MT-CO3P00414 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
MT-CO3P00414 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
MT-CO3P00414 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.01■■□□□ 1.91
MT-CO3P00414 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27■■□□□ 1.91
MT-CO3P00414 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
MT-CO3P00414 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27■■□□□ 1.91
MT-CO3P00414 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
MT-CO3P00414 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
MT-CO3P00414 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
MT-CO3P00414 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.95■■□□□ 1.9
MT-CO3P00414 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.95■■□□□ 1.9
MT-CO3P00414 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.94■■□□□ 1.9
MT-CO3P00414 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.93■■□□□ 1.9
MT-CO3P00414 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MT-CO3P00414 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
MT-CO3P00414 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
MT-CO3P00414 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MT-CO3P00414 MIR3665-201ENST00000578708 105 ntBASIC26.91■■□□□ 1.9
MT-CO3P00414 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MT-CO3P00414 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
MT-CO3P00414 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
MT-CO3P00414 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.89■■□□□ 1.9
MT-CO3P00414 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.89■■□□□ 1.89
MT-CO3P00414 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
MT-CO3P00414 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.88■■□□□ 1.89
MT-CO3P00414 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.86■■□□□ 1.89
MT-CO3P00414 ABHD17AP4-201ENST00000411545 909 ntBASIC26.82■■□□□ 1.88
MT-CO3P00414 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MT-CO3P00414 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
MT-CO3P00414 MIR7108-201ENST00000614319 87 ntBASIC26.78■■□□□ 1.88
MT-CO3P00414 AC087741.3-201ENST00000624270 1347 ntBASIC26.77■■□□□ 1.88
MT-CO3P00414 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.76■■□□□ 1.87
MT-CO3P00414 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MT-CO3P00414 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.75■■□□□ 1.87
MT-CO3P00414 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
MT-CO3P00414 DUX4L28-201ENST00000623687 678 ntBASIC26.74■■□□□ 1.87
MT-CO3P00414 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.74■■□□□ 1.87
MT-CO3P00414 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.74■■□□□ 1.87
MT-CO3P00414 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
MT-CO3P00414 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
MT-CO3P00414 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.72■■□□□ 1.87
MT-CO3P00414 MIR762-201ENST00000390236 83 ntBASIC26.71■■□□□ 1.87
MT-CO3P00414 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.71■■□□□ 1.87
MT-CO3P00414 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
MT-CO3P00414 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
MT-CO3P00414 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
MT-CO3P00414 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.68■■□□□ 1.86
MT-CO3P00414 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MT-CO3P00414 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MT-CO3P00414 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.67■■□□□ 1.86
MT-CO3P00414 AC044849.2-201ENST00000606596 710 ntBASIC26.67■■□□□ 1.86
MT-CO3P00414 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-CO3P00414 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-CO3P00414 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MT-CO3P00414 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
MT-CO3P00414 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.65■■□□□ 1.86
MT-CO3P00414 AC005559.1-201ENST00000589661 871 ntBASIC26.65■■□□□ 1.86
MT-CO3P00414 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.64■■□□□ 1.86
MT-CO3P00414 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
MT-CO3P00414 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.63■■□□□ 1.85
MT-CO3P00414 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MT-CO3P00414 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.61■■□□□ 1.85
MT-CO3P00414 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
MT-CO3P00414 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
MT-CO3P00414 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
MT-CO3P00414 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
MT-CO3P00414 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.58■■□□□ 1.85
MT-CO3P00414 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
MT-CO3P00414 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO3P00414 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MT-CO3P00414 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MT-CO3P00414 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.53■■□□□ 1.84
MT-CO3P00414 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.53■■□□□ 1.84
MT-CO3P00414 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
MT-CO3P00414 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
MT-CO3P00414 HLA-V-202ENST00000446817 847 ntBASIC26.52■■□□□ 1.84
MT-CO3P00414 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
MT-CO3P00414 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
MT-CO3P00414 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.52■■□□□ 1.84
MT-CO3P00414 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.51■■□□□ 1.83
MT-CO3P00414 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.49■■□□□ 1.83
MT-CO3P00414 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.48■■□□□ 1.83
MT-CO3P00414 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
MT-CO3P00414 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
MT-CO3P00414 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
MT-CO3P00414 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.46■■□□□ 1.83
MT-CO3P00414 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.45■■□□□ 1.83
MT-CO3P00414 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.45■■□□□ 1.82
MT-CO3P00414 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.45■■□□□ 1.82
MT-CO3P00414 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
MT-CO3P00414 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
MT-CO3P00414 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
MT-CO3P00414 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.42■■□□□ 1.82
MT-CO3P00414 ZNRF2P2-203ENST00000454624 420 ntBASIC26.42■■□□□ 1.82
MT-CO3P00414 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms