Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOMM40O96008 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TOMM40O96008 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TOMM40O96008 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TOMM40O96008 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.61■■□□□ 1.05
TOMM40O96008 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.6■■□□□ 1.05
TOMM40O96008 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOMM40O96008 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOMM40O96008 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TOMM40O96008 ZNRF2P1-201ENST00000441407 443 ntBASIC21.59■■□□□ 1.05
TOMM40O96008 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TOMM40O96008 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.58■■□□□ 1.05
TOMM40O96008 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.58■■□□□ 1.04
TOMM40O96008 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.57■■□□□ 1.04
TOMM40O96008 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TOMM40O96008 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TOMM40O96008 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TOMM40O96008 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TOMM40O96008 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TOMM40O96008 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.54■■□□□ 1.04
TOMM40O96008 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOMM40O96008 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TOMM40O96008 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TOMM40O96008 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOMM40O96008 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TOMM40O96008 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.52■■□□□ 1.04
TOMM40O96008 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TOMM40O96008 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.52■■□□□ 1.03
TOMM40O96008 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
TOMM40O96008 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.5■■□□□ 1.03
TOMM40O96008 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.5■■□□□ 1.03
TOMM40O96008 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOMM40O96008 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOMM40O96008 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TOMM40O96008 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.49■■□□□ 1.03
TOMM40O96008 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
TOMM40O96008 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TOMM40O96008 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TOMM40O96008 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TOMM40O96008 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TOMM40O96008 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TOMM40O96008 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TOMM40O96008 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.46■■□□□ 1.03
TOMM40O96008 AC139426.1-201ENST00000568218 2529 ntBASIC21.46■■□□□ 1.03
TOMM40O96008 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TOMM40O96008 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TOMM40O96008 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TOMM40O96008 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.41■■□□□ 1.02
TOMM40O96008 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.41■■□□□ 1.02
TOMM40O96008 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TOMM40O96008 AC120057.4-201ENST00000624722 1615 ntBASIC21.4■■□□□ 1.02
TOMM40O96008 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TOMM40O96008 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.39■■□□□ 1.01
TOMM40O96008 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TOMM40O96008 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TOMM40O96008 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.37■■□□□ 1.01
TOMM40O96008 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TOMM40O96008 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TOMM40O96008 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TOMM40O96008 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TOMM40O96008 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.34■■□□□ 1.01
TOMM40O96008 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TOMM40O96008 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TOMM40O96008 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TOMM40O96008 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.31■■□□□ 1
TOMM40O96008 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.3■■□□□ 1
TOMM40O96008 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.29■■□□□ 1
TOMM40O96008 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.28■■□□□ 1
TOMM40O96008 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TOMM40O96008 DYNLL1-208ENST00000550178 581 ntBASIC21.28■■□□□ 1
TOMM40O96008 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.28■■□□□ 1
TOMM40O96008 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TOMM40O96008 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TOMM40O96008 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TOMM40O96008 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TOMM40O96008 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TOMM40O96008 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TOMM40O96008 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.23■□□□□ 0.99
TOMM40O96008 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TOMM40O96008 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TOMM40O96008 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TOMM40O96008 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.21■□□□□ 0.99
TOMM40O96008 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.2■□□□□ 0.98
TOMM40O96008 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TOMM40O96008 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOMM40O96008 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TOMM40O96008 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.18■□□□□ 0.98
TOMM40O96008 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOMM40O96008 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOMM40O96008 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOMM40O96008 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TOMM40O96008 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.16■□□□□ 0.98
TOMM40O96008 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TOMM40O96008 AL031258.1-201ENST00000623562 325 ntBASIC21.14■□□□□ 0.97
TOMM40O96008 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOMM40O96008 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TOMM40O96008 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOMM40O96008 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TOMM40O96008 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TOMM40O96008 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms