Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Tnfaip1O70479 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.52■■■□□ 2.16
Tnfaip1O70479 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tnfaip1O70479 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.52■■■□□ 2.16
Tnfaip1O70479 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tnfaip1O70479 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Tnfaip1O70479 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tnfaip1O70479 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tnfaip1O70479 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Tnfaip1O70479 Gm45855-201ENSMUST00000212546 880 ntBASIC28.46■■■□□ 2.15
Tnfaip1O70479 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.45■■■□□ 2.14
Tnfaip1O70479 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Tnfaip1O70479 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Tnfaip1O70479 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.42■■■□□ 2.14
Tnfaip1O70479 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
Tnfaip1O70479 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tnfaip1O70479 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tnfaip1O70479 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tnfaip1O70479 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tnfaip1O70479 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Tnfaip1O70479 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tnfaip1O70479 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tnfaip1O70479 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Tnfaip1O70479 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tnfaip1O70479 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Tnfaip1O70479 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tnfaip1O70479 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Tnfaip1O70479 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tnfaip1O70479 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tnfaip1O70479 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tnfaip1O70479 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.25■■■□□ 2.11
Tnfaip1O70479 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tnfaip1O70479 Gm9397-201ENSMUST00000200125 605 ntBASIC28.21■■■□□ 2.11
Tnfaip1O70479 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tnfaip1O70479 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tnfaip1O70479 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.16■■■□□ 2.1
Tnfaip1O70479 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tnfaip1O70479 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
Tnfaip1O70479 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tnfaip1O70479 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.12■■■□□ 2.09
Tnfaip1O70479 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tnfaip1O70479 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tnfaip1O70479 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tnfaip1O70479 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tnfaip1O70479 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.1■■■□□ 2.09
Tnfaip1O70479 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.08■■■□□ 2.09
Tnfaip1O70479 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Tnfaip1O70479 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tnfaip1O70479 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tnfaip1O70479 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tnfaip1O70479 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tnfaip1O70479 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Tnfaip1O70479 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tnfaip1O70479 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.03■■■□□ 2.08
Tnfaip1O70479 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Tnfaip1O70479 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tnfaip1O70479 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.01■■■□□ 2.08
Tnfaip1O70479 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.99■■■□□ 2.07
Tnfaip1O70479 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Tnfaip1O70479 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.97■■■□□ 2.07
Tnfaip1O70479 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Tnfaip1O70479 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.95■■■□□ 2.06
Tnfaip1O70479 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Tnfaip1O70479 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Tnfaip1O70479 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Tnfaip1O70479 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tnfaip1O70479 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.91■■■□□ 2.06
Tnfaip1O70479 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Tnfaip1O70479 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Tnfaip1O70479 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tnfaip1O70479 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tnfaip1O70479 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tnfaip1O70479 Gm24970-201ENSMUST00000175582 82 ntBASIC27.86■■■□□ 2.05
Tnfaip1O70479 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Tnfaip1O70479 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Tnfaip1O70479 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tnfaip1O70479 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Tnfaip1O70479 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Tnfaip1O70479 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.81■■■□□ 2.04
Tnfaip1O70479 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.79■■■□□ 2.04
Tnfaip1O70479 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Tnfaip1O70479 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.77■■■□□ 2.04
Tnfaip1O70479 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Tnfaip1O70479 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.76■■■□□ 2.03
Tnfaip1O70479 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Tnfaip1O70479 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.75■■■□□ 2.03
Tnfaip1O70479 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfaip1O70479 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfaip1O70479 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Tnfaip1O70479 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfaip1O70479 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
Tnfaip1O70479 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Tnfaip1O70479 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Tnfaip1O70479 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Tnfaip1O70479 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
Tnfaip1O70479 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Tnfaip1O70479 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tnfaip1O70479 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Tnfaip1O70479 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Tnfaip1O70479 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms