Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HCN1O60741 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCN1O60741 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCN1O60741 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
HCN1O60741 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HCN1O60741 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HCN1O60741 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
HCN1O60741 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.67■■□□□ 1.7
HCN1O60741 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.67■■□□□ 1.7
HCN1O60741 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCN1O60741 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCN1O60741 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
HCN1O60741 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HCN1O60741 RARRES2P7-201ENST00000567349 469 ntBASIC25.65■■□□□ 1.7
HCN1O60741 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HCN1O60741 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
HCN1O60741 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HCN1O60741 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.61■■□□□ 1.69
HCN1O60741 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
HCN1O60741 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HCN1O60741 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.58■■□□□ 1.69
HCN1O60741 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HCN1O60741 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.58■■□□□ 1.69
HCN1O60741 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
HCN1O60741 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
HCN1O60741 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HCN1O60741 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.57■■□□□ 1.68
HCN1O60741 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HCN1O60741 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.55■■□□□ 1.68
HCN1O60741 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HCN1O60741 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.54■■□□□ 1.68
HCN1O60741 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HCN1O60741 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HCN1O60741 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.52■■□□□ 1.68
HCN1O60741 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCN1O60741 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.51■■□□□ 1.67
HCN1O60741 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HCN1O60741 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
HCN1O60741 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
HCN1O60741 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HCN1O60741 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HCN1O60741 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HCN1O60741 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
HCN1O60741 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
HCN1O60741 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.46■■□□□ 1.67
HCN1O60741 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.46■■□□□ 1.67
HCN1O60741 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HCN1O60741 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.44■■□□□ 1.66
HCN1O60741 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
HCN1O60741 SETD8P1-201ENST00000623146 1180 ntBASIC25.44■■□□□ 1.66
HCN1O60741 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
HCN1O60741 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.42■■□□□ 1.66
HCN1O60741 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.42■■□□□ 1.66
HCN1O60741 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HCN1O60741 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HCN1O60741 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.39■■□□□ 1.66
HCN1O60741 AC097358.2-201ENST00000607541 1159 ntBASIC25.39■■□□□ 1.66
HCN1O60741 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.39■■□□□ 1.65
HCN1O60741 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.38■■□□□ 1.65
HCN1O60741 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
HCN1O60741 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
HCN1O60741 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
HCN1O60741 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
HCN1O60741 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCN1O60741 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
HCN1O60741 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HCN1O60741 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HCN1O60741 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.33■■□□□ 1.65
HCN1O60741 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCN1O60741 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HCN1O60741 AC136428.2-201ENST00000563187 214 ntBASIC25.31■■□□□ 1.64
HCN1O60741 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.31■■□□□ 1.64
HCN1O60741 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
HCN1O60741 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.29■■□□□ 1.64
HCN1O60741 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HCN1O60741 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.26■■□□□ 1.63
HCN1O60741 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HCN1O60741 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.24■■□□□ 1.63
HCN1O60741 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HCN1O60741 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
HCN1O60741 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.22■■□□□ 1.63
HCN1O60741 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.22■■□□□ 1.63
HCN1O60741 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
HCN1O60741 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HCN1O60741 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.2■■□□□ 1.62
HCN1O60741 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
HCN1O60741 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.19■■□□□ 1.62
HCN1O60741 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
HCN1O60741 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HCN1O60741 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HCN1O60741 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HCN1O60741 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCN1O60741 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HCN1O60741 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms